| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1033 |
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| Symbol | |
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| ID | 5868793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1177851 |
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| End bp | 1179308 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546134 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001667279 |
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| Protein GI | 167032048 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.336568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.533813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCC ACACTGCTTT GCGCCAGCGT TGCGCCAAAT GGCTTTTCGC AACCGGACTC
TTTCTGCTGC TCGGTGCCTG CGTTGAAAAA CCCAGCACCC TCGAGCGCGT GAAGGAGGAT
GGCGTGCTGC GCGTGATCAC CCGCAACAGC CCGGCCACCT ACTTCCAGGA CCGCAACGGC
GAAACCGGCT TCGAATACGA GCTAGTCCAG CATTTCGCCG AAGATCTCGG CGTAAAGCTG
CAGATCGAGA CCGCCGACAA CCTCGACGAG CTGTACGACG CCCTAGGCAA ACCCTCTGGC
CCGGTACTGG CCGCAGCCGG CCTGGTCAGC AGCGAGCGGC GCAAGGCCCA GGTGAAATAC
TCGCACCCGT ACCTGGAAGT GACGCCACAG GTCATCTACC GCAACGGCCG CCCACGCCCG
ACCAACGCCA AGGGTCTGGT CGGCAAGAAA ATCATGGTGC TCAAGGGCAG CAGCCATGCC
GACCTGCTGG CTGAGCTGAA AAAGCAGAAC CCTGGCCTGG AATATGAAGA GTCCGACGCC
GTCGAGGTGG TCGACCTGCT GCGCATGGTC GATGAAGGGC AGATCGACCT GACCCTGGTC
GACTCCAACG AACTGGCGAT GAACCAAGTG TACTTCCCTA ACGTGCGAGT CGCCTTCGAC
GTGGGTGATA CCCGCGACCA GCGCTGGGCC GTGGCGGCAG GCGAAGACAA CAGCCTGCTC
AACGAGATCA ACGAGTTTCT CGACAAGGCG CAAAAGAACG GCACGCTGCA GCGCCTGAAA
GACCGCTACT ACGGCCATGT CGACGTATTG GGCTATGTCG GTGCCTACAC CTTCGCCCAG
CACCTGCAAC AACGCCTGCC CAAGTACGAA AAACACTTCA AGAGCTACGC CAAGGTCGAG
CAGGTCGACT GGCGCCTGCT GGCCGCGATC GGCTACCAGG AGTCGATGTG GCAGCCGGAA
GTCACCTCCA AGACCGGCGT GCGCGGCCTG ATGATGCTGA CCCAACGCAC CGCCCAGGCG
ATGGGTGTGT CCAACCGACT GGACCCCAAG CAGAGCATTC AGGGCGGCGC CAAGTATTTC
ATGAAGATCA AGGAAGAGCT CGACGACAGC ATTCAGGAGC CGGACCGCAC CTGGTTCGCC
CTGGCAGCCT ATAACGTGGG TACCGGCCAC CTGGAAGACG CCCGGACCCT GGCCAAGCGC
GAAAAGCTCA ACCCGAACAA GTGGCTGGAC GTCAAGAAGA TGCTGCCACG CCTGTCACAG
AAGCAGTGGT ACCGGCAGAC CAAGTACGGT TATGCCCGTG GCGGCGAGCC GGTGCACTTC
GTGGCCAACA TCCGTCGTTA CTACGACATC CTTACCTGGG TGACCCAACC GCAGCTCGAA
GGCCAGGTGG CCGAGGGCAA CCTGCATGTG CCTGGGGTGA ACAAGGACAA GCCGGCTGAT
CAGTCGCCGC CGATGTAA
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| Protein sequence | MFAHTALRQR CAKWLFATGL FLLLGACVEK PSTLERVKED GVLRVITRNS PATYFQDRNG
ETGFEYELVQ HFAEDLGVKL QIETADNLDE LYDALGKPSG PVLAAAGLVS SERRKAQVKY
SHPYLEVTPQ VIYRNGRPRP TNAKGLVGKK IMVLKGSSHA DLLAELKKQN PGLEYEESDA
VEVVDLLRMV DEGQIDLTLV DSNELAMNQV YFPNVRVAFD VGDTRDQRWA VAAGEDNSLL
NEINEFLDKA QKNGTLQRLK DRYYGHVDVL GYVGAYTFAQ HLQQRLPKYE KHFKSYAKVE
QVDWRLLAAI GYQESMWQPE VTSKTGVRGL MMLTQRTAQA MGVSNRLDPK QSIQGGAKYF
MKIKEELDDS IQEPDRTWFA LAAYNVGTGH LEDARTLAKR EKLNPNKWLD VKKMLPRLSQ
KQWYRQTKYG YARGGEPVHF VANIRRYYDI LTWVTQPQLE GQVAEGNLHV PGVNKDKPAD
QSPPM
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