Gene PputGB1_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_1030 
SymbolguaA 
ID5868790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1174196 
End bp1175773 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content63% 
IMG OID641546131 
ProductGMP synthase 
Protein accessionYP_001667276 
Protein GI167032045 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCG ACATTCACGC TCACCGCATC CTGATCCTCG ATTTCGGTTC CCAGTACACC 
CAGCTGATCG CCCGCCGTGT GCGCGAAATC GGCGTGTACT GCGAACTGCA CCCGTTCGAC
ATGGACGATG AAGCGATCCG CGAATTCAAC CCGCGCGGCA TCATCCTCGC CGGCGGCCCC
GAGTCGGTTC ACGAAGCCAA CAGCCCGCGC GCGCCGCAGG CCGTGTTCGA CCTGAACGTA
CCCGTGCTGG GCATCTGCTA CGGCATGCAG ACCATGGCCG AGCAAATGGG CGGCAAGGTC
GAAGGTTCCG ACCTGCGTGA GTTCGGTTAT GCCCGCGTGG ACGTGGTCGG CAAGAGCCGC
CTGCTCGACG GCATCGAAGA CCACGTTGAC GACGACGGCG TGCTGGGCCT GGACGTGTGG
ATGAGCCACG GCGACAAGGT CACCCAGATG CCGGGCAACT TCAACATCCT GGCCAGCACC
CCAAGCTGCC CGATCGCCGG CATGTACGAC GATGCCCGCG GCTACTACGG CGTGCAATTC
CACCCGGAAG TGACCCACAC CAAGCAGGGC GGTCGCATCC TGTCCCGCTT CGTGCAGGAC
ATCTGCGGCT GTGAAGCCCT GTGGACCGCG TCCAACATCG TCGAAGACGC CATCGCCCAG
GTGCGTGCAC AAGTAGGTTC GGCCAACGTC CTGCTGGGCC TGTCCGGCGG CGTTGACAGC
TCGGTGGTTG CCGCGCTGCT GCACCGTGCC ATCGGCGACC AGCTGACCTG CGTATTCGTC
GACAACGGCC TGCTGCGCCT GCACGAAGGT GACCAGGTGA TGGCCATGTT CAAAGAGAAC
ATGGGCGTCA AGGTGATCCG TGCCGATGCT GAAAAGCAGT TCCTCGACAA CCTGGAAGGC
GAAGCCGACC CAGAGAAGAA GCGCAAGATC ATCGGCCGCA CCTTCATCGA CATCTTCGAT
GCCGAAGCCA GCAAGCTGGA AAACATCCAG TTCCTCGCCC AAGGCACCAT CTACCCGGAC
GTGATCGAGT CGGCGGGTGC CAAGAGCGGC AAGGCCCATG TGATCAAGTC GCACCACAAC
GTGGGTGGCC TGCCAGAGGA AATGAACCTC AAGCTGGTCG AGCCGCTGCG TGAACTGTTC
AAGGACGAAG TGCGCAAGAT CGGCCTGGAG CTGGGCCTGC CGTACGACAT GGTCTACCGC
CACCCGTTCC CAGGCCCGGG CCTGGGCGTG CGTATCCTCG GTGAAGTGAA GAAGGAATAC
GCCGACATCC TGCGTCGCGC CGACCACATC TTCATCGAAG AACTGCGCAA GGCCGATTGG
TACCACAAGA CCAGCCAGGC GTTCGTGGTG TTCCAGCCGG TCAAGTCGGT TGGCGTCGTT
GGCGACGGCC GTCGCTACGC CTGGGTCGTG GCCCTGCGTG CCGTCGAGAC CGTGGACTTC
ATGACCGCGC GTTGGGCGCA CCTGCCGTAC GAGCTGCTGG AAACCGTCAG CGGCCGTATC
ATCAACGAAA TCGACGGTAT CTCGCGCGTT ACCTACGACG TGTCGAGCAA GCCGCCTGCC
ACTATCGAGT GGGAATAA
 
Protein sequence
MALDIHAHRI LILDFGSQYT QLIARRVREI GVYCELHPFD MDDEAIREFN PRGIILAGGP 
ESVHEANSPR APQAVFDLNV PVLGICYGMQ TMAEQMGGKV EGSDLREFGY ARVDVVGKSR
LLDGIEDHVD DDGVLGLDVW MSHGDKVTQM PGNFNILAST PSCPIAGMYD DARGYYGVQF
HPEVTHTKQG GRILSRFVQD ICGCEALWTA SNIVEDAIAQ VRAQVGSANV LLGLSGGVDS
SVVAALLHRA IGDQLTCVFV DNGLLRLHEG DQVMAMFKEN MGVKVIRADA EKQFLDNLEG
EADPEKKRKI IGRTFIDIFD AEASKLENIQ FLAQGTIYPD VIESAGAKSG KAHVIKSHHN
VGGLPEEMNL KLVEPLRELF KDEVRKIGLE LGLPYDMVYR HPFPGPGLGV RILGEVKKEY
ADILRRADHI FIEELRKADW YHKTSQAFVV FQPVKSVGVV GDGRRYAWVV ALRAVETVDF
MTARWAHLPY ELLETVSGRI INEIDGISRV TYDVSSKPPA TIEWE