| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1025 |
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| Symbol | xseA |
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| ID | 5868785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1168759 |
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| End bp | 1170150 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641546126 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_001667271 |
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| Protein GI | 167032040 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCTG CCATGATCAA AGACCCCTTC GAACGACTCG GCCTGGACCG CGAGGTCCTT
ACCGTCAGCC AACTCAATGG CCGCGCCCGC GTGCTGCTGG AAGACGTGTT CCGCAGCGTC
TGGGTGGAAG GCGAAATCTC CAACCTCGCC CGCCCGGCGT CCGGCCACAT GTACTTCACC
CTCAAGGACA GTGGCGCCCA GGTGCGTTGT GCGTTGTTCC GACAGAACGC CACACGGGTG
CGCCAAGCCC TGCGCGACGG CCTGGCGGTG CGGGTGCGCG GCAAGGTTTC GCTGTTCGAG
GGGCGTGGCG ACTACCAGCT GATTCTCGAC ACCGTCGAGC CGGCCGGCGA TGGTGCCCTG
CGGCTGGCCT TCGAGGCGCT GAAGGAAAAG CTCGGTGCCG AGGGGCTGTT CAGCACCGAA
CGCAAGAAGC CGCTGCCAGC CCACCCGCAA CGCATCGGCA TCATCACCTC GCCCACGGGC
GCTGTGATCC GCGACATCAT CAGCGTGTTC GGCCGCCGTG CCCCGCAGGT GGAACTGAAC
CTGATTCCTA CGGCAGTACA AGGCCGCGAA GCCATCGCGC AGATCGTGCG CGCCATTCGC
CTGGCCGACA GCCTTGGCTT CGATGCACTG ATCCTGGCCC GTGGTGGCGG CTCGCTGGAG
GACCTGTGGT GCTTCAACGA AGAAGCCGTG GCGCGTGCCG TGGCCGCCTG CGTCACCCCG
ATAGTCAGCG CCGTGGGCCA TGAAACCGAC GTATCGATCA GCGACTTCGT CGCCGACATG
CGCGCGCCCA CCCCGTCTGC CGCCGCCGAG CTGCTGGCCC CCGACAACAG CGGCCTGCAG
CAACGCCTGG ATGGCCTGCA GCGGCGCCTG CTCCTGCGCA TGCAGAACCG CCTGACCCAC
GACCGCCTGC GCCTGGAGTC ACTGACCCGG CGCCTGCGCC ACCCAGGCGA GCGCTTGCGT
CAGCAGGCAC AGCGCCTGGA CGACCTGGAC ATGCGCCTGC GTCGCGCCTT CATGCTCAAC
CTCAACCAGC GCCGCGAACG CCTGGCGCGC CTGGACACCC GCCTGGCCGC GCAGCACCCG
GGGCGTAACC TGAAGCTGTT GAAACAACGC CTGGACAGCC TGGCCGAGCG CCTGCCACGG
GCCATGCGCG ATGTGTTGAA AGACCGTCGC CAACGCTTCC AGGCCCAACT GCAAACCCTG
CAGGTGGTCA GCCCGCTGGC CACCCTCGCC CGCGGCTACA GCATCCTGCT GGACGACCAG
GGCCAGGCCA TTCGCAGCGC CGAACAAACC CGCAATGGCC AGCGCCTCAC CGCCCGCCTG
AACGAAGGCG AGCTGCTGGT GCGGGTCGAA GACAACCACC AGACCCCGGT CACCCTCTCA
CTACTGGACT GA
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| Protein sequence | MMPAMIKDPF ERLGLDREVL TVSQLNGRAR VLLEDVFRSV WVEGEISNLA RPASGHMYFT
LKDSGAQVRC ALFRQNATRV RQALRDGLAV RVRGKVSLFE GRGDYQLILD TVEPAGDGAL
RLAFEALKEK LGAEGLFSTE RKKPLPAHPQ RIGIITSPTG AVIRDIISVF GRRAPQVELN
LIPTAVQGRE AIAQIVRAIR LADSLGFDAL ILARGGGSLE DLWCFNEEAV ARAVAACVTP
IVSAVGHETD VSISDFVADM RAPTPSAAAE LLAPDNSGLQ QRLDGLQRRL LLRMQNRLTH
DRLRLESLTR RLRHPGERLR QQAQRLDDLD MRLRRAFMLN LNQRRERLAR LDTRLAAQHP
GRNLKLLKQR LDSLAERLPR AMRDVLKDRR QRFQAQLQTL QVVSPLATLA RGYSILLDDQ
GQAIRSAEQT RNGQRLTARL NEGELLVRVE DNHQTPVTLS LLD
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