Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1019 |
Symbol | |
ID | 5868779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1161786 |
End bp | 1162658 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641546120 |
Product | DNA-binding transcriptional regulator HexR |
Protein accession | YP_001667265 |
Protein GI | 167032034 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.150266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCGCG TGCGAAACCT CCTGGAACAG ATCCAGGGAC GCCTCGACGA GCTGAACAAG GCCGAACGCA AAGTCGCCGA AGTCATCTTG CTCAACCCGC AACAAGCCAC TCGTTTCAGC ATCGCTGCTC TGGCCCAGGC GGCCAAGGTC AGCGAACCGA CCGTCAACCG CTTCTGCCGC TCGTTTGGCG TCAGCGGCTA CCCGGAACTC AAGCTGCAAC TGGCGCAGAG CCTGGCCAGC GGCGCCGCCT ATGTCAGCCG TGCGGTAGAA GCCGACGATG ACCCGGCAGC CTACACCCAG AAGATCTTCG CCAGTGCCAT CGCCTCGCTC GACGGCGCTT GCCAGCAACT GGACCCGCAG CAGGTCAGCC GTGCGGTGGA CATGATGATC CAGGCCCGAC AGATCCACTT CTTCGGCCTA GGCGCCTCGG CCCCGGTGGC CCTGGATGCG CAGCACAAGT TCTTCCGCTT CAACCTGGCG GTGTCAGCCC ATGCCGACGT GCTGATGCAG CGCATGCTGG CCTCGGTGGC GCACACCGGC GACCTGTTCG TGATCATTTC CTACACCGGG CGCACCCGCG AACTGGTCGA AGTGGCGCGC CTGGCACGCG AAAACGGCGC CTCGGTGCTG GGCCTGACCG CCGCAGGCTC GCCACTGGCC AATGCCTGCA GCCTGAGCCT GCACATCCCA CTGCCGGAAG ACACCGACAT CTACATGCCG ATGACCTCGC GGATCATCCA GCTGACCGTG CTCGATGTGC TGGCCACCGG CATGACCCTG CGCCGCGGCG TGGACTTCCA GCCGCACCTG CGCAAGATCA AGGAAAGCCT CAACGCCAGC CGCTACCCGA TCGAGGACGA CGAACTCAAC TGA
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Protein sequence | MDRVRNLLEQ IQGRLDELNK AERKVAEVIL LNPQQATRFS IAALAQAAKV SEPTVNRFCR SFGVSGYPEL KLQLAQSLAS GAAYVSRAVE ADDDPAAYTQ KIFASAIASL DGACQQLDPQ QVSRAVDMMI QARQIHFFGL GASAPVALDA QHKFFRFNLA VSAHADVLMQ RMLASVAHTG DLFVIISYTG RTRELVEVAR LARENGASVL GLTAAGSPLA NACSLSLHIP LPEDTDIYMP MTSRIIQLTV LDVLATGMTL RRGVDFQPHL RKIKESLNAS RYPIEDDELN
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