| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1009 |
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| Symbol | |
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| ID | 5868769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1149807 |
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| End bp | 1151633 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546110 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001667255 |
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| Protein GI | 167032024 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.241046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCGC GCATCCTTGA GGTCACCCAG CGGCTGGTCG AACGCAGCCG TGCCACCCGC
GAACGTTACC TGCAGCTGAT TCGCGGCGCG GCCAGTGAAG GCCCCATGCG TGCCAGCCTG
CAGTGCGCCA ACTTCGCCCA CGGCGTGGCC GGTTGCGGCA GCGAAGACAA GCACACGCTG
CGCCTGATGA ACGCGGCCAA CGTGGCTATC GTCTCGGCCT ACAACGACAT GTTGTCCGCC
CACCAGCCGT ACCTGCATTT CCCCGAGCAA ATCAAGCAGG CCCTGCGTGA GGTCGGCTCG
GTCGGCCAGT TCGCCGGTGG CGTGCCGGCC ATGTGCGACG GTGTGACCCA GGGCGAGCCG
GGCATGGAAC TGGCCATCGC CAGCCGCGAA GTGATCGCCA TGTCCACGGC TGTCGCGCTG
TCGCACAACA TGTTCGACGC CGCGCTGATG CTGGGCATAT GCGACAAGAT CGTTCCTGGC
CTGATGATGG GCGCGCTGCG TTTCGGCCAC TTGCCGACCA TTTTCGTACC GGGTGGGCCA
ATGGTGTCCG GCATTTCCAA CAAGCAGAAG GCCGACGTGC GCCAGCGCTA TGCCGAAGGC
AAGGCCAGCC GTGAGGAACT GCTGGAGTCG GAGATGAATT CCTACCACAG CCCAGGCACC
TGCACCTTCT ACGGCACCGC CAATACCAAC CAACTGGTGA TGGAGGTAAT GGGCCTGCAC
CTGCCGGGCG CTTCGTTCGT CAACCCGTAC ACACCGCTGC GCGACGCACT CACCGCCGAG
GCTGCGCAGC AGGTGACACG CATGACCAAG GCCAGTGGCA GCTTCATGCC GCTGGGTGAA
ATCGTCGACG AAAAAGCGTT GGTCAACTCC ATCGTCGCCC TGCACGCTAC CGGCGGCTCG
ACCAACCACA CCCTGCACAT TCCAGCGATT GCCCAGGCTG CGGGTATCCA GCTGACCTGG
CAGGACATGG CCGACCTTTC CGAAGTGGTG CCGACCCTGT CGCACGTCTA CCCCAACGGC
AAGGCCGACA TCAACCACTT CCAGGCGGCT GGTGGCATGG CCTTCCTGAT CCGCGAGCTG
CTCGACGCCG GGCTGCTGCA CGAGGATGTC AATACCGTGG CCGGCCACGG CTTGCGTCGC
TACACCCAGG AACCGTTCCT CGACAACGGC AAGCTGGTGT GGCGCGAAGG GCCGCAGCAG
AGCCTGGACG AGAGCATCCT GCGCCCGGTG GCGCGGCCGT TCTCCGCCGA AGGCGGCCTG
CGGGTGATGG AGGGCAACCT GGGCCGTGGC GTGATGAAAG TGTCCGCCGT CGCCGCCGAA
CATCAGGTGG TCGAGGCCCC GGCGCGGGTG TTCCAGGACC AGCAGTCGCT GGCCGATGCG
TTCAAGGCCG GTGAGCTTGA GCGTGACTTT GTCGCCGTGG TGCGCTTCCA GGGGCCACGT
TGCAACGGCA TGCCAGAGCT GCACAAGCTA ACGCCATTCC TCGGTGTGCT GCAGGACCGT
GGCTACAAGG TAGCGCTGGT TACAGACGGG CGTATGTCCG GTGCCTCGGG CAAGATCCCG
GCGGCTATCC ACGTTTGCCC CGAGGCTTAC GACGGCGGCC CGCTGGCGCG TGTGCGCGAT
GGTGATATCG TGCGGGTCGA TGGTGTCGAA GGTACCTTGC GGGTCATGGT CTCGGCCGAA
GAGTTGGCCA GCCGCGATCT GCCGCCGGCG CCCCAGGGCA ATGACCTGGG TTGCGGGCGC
GAGCTGTTCG GCTTCATGCG CATGGCGTTC AGCCCGGCAG AGCAGGGCGC GAGTGCGTTC
ACTTCGGCCC TGGAGAACCT CAAATGA
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| Protein sequence | MHPRILEVTQ RLVERSRATR ERYLQLIRGA ASEGPMRASL QCANFAHGVA GCGSEDKHTL
RLMNAANVAI VSAYNDMLSA HQPYLHFPEQ IKQALREVGS VGQFAGGVPA MCDGVTQGEP
GMELAIASRE VIAMSTAVAL SHNMFDAALM LGICDKIVPG LMMGALRFGH LPTIFVPGGP
MVSGISNKQK ADVRQRYAEG KASREELLES EMNSYHSPGT CTFYGTANTN QLVMEVMGLH
LPGASFVNPY TPLRDALTAE AAQQVTRMTK ASGSFMPLGE IVDEKALVNS IVALHATGGS
TNHTLHIPAI AQAAGIQLTW QDMADLSEVV PTLSHVYPNG KADINHFQAA GGMAFLIREL
LDAGLLHEDV NTVAGHGLRR YTQEPFLDNG KLVWREGPQQ SLDESILRPV ARPFSAEGGL
RVMEGNLGRG VMKVSAVAAE HQVVEAPARV FQDQQSLADA FKAGELERDF VAVVRFQGPR
CNGMPELHKL TPFLGVLQDR GYKVALVTDG RMSGASGKIP AAIHVCPEAY DGGPLARVRD
GDIVRVDGVE GTLRVMVSAE ELASRDLPPA PQGNDLGCGR ELFGFMRMAF SPAEQGASAF
TSALENLK
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