Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0976 |
Symbol | |
ID | 5868736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1111845 |
End bp | 1112495 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546077 |
Product | GntR domain-containing protein |
Protein accession | YP_001667222 |
Protein GI | 167031991 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.664678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACAG AATTGACCAA GCGTTCCTTG GTGGAACTGG CGGTTGAACG TATGCGCGAA CGCATCGTTT TGGGCGACTG GCAGGTCGGC CAGCGCCTGC CGACCGAACC GGAACTGGCC CTGCAGCTGG GCATCAGCCG TAACACCGTC CGTGAGGCCA TGCGCGTGCT GGCTTTCAGT GGCTTGGTAG AAATCCGCCA GGGTGATGGC AGCTACCTGC GCACGGCCCA GGACCCGCTG CAGGCGGTGC AGGCAATGTC GCGCTGCACC CCCGAGCAGG CCCGTGAAAC CCGCCATATC CTCGAAACCG AGGCTATCGG CCTGGCGGCC TTGCGACGTA CCGACGCCGA CCTGCAGGCG CTACGTGATG CCCTGGCAGG CAGTGCCGGG CACTTTCACG GGGATGTCGA TGCCTATGTG ACGTGTGATC TGGTGTTTCA CCAACGGCTG GTCGATGCCG CCCACAACCC GGCGTTAAGC GAGCTGTATC GTTACTTTTC CGGGGTGGTG GCTGCCGCGC TGCAGCGCAA CATGGCGACC GTGCCACGCT GCCAGGCCAC GTTCGACCTG CATGGGCAGA TCCTCGACGC CATCGAGCAA CGCGACGCGG AGCGGGCCAA GCGCCTGAGC CGTACCCTCA TCGAATCCTG A
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Protein sequence | MSTELTKRSL VELAVERMRE RIVLGDWQVG QRLPTEPELA LQLGISRNTV REAMRVLAFS GLVEIRQGDG SYLRTAQDPL QAVQAMSRCT PEQARETRHI LETEAIGLAA LRRTDADLQA LRDALAGSAG HFHGDVDAYV TCDLVFHQRL VDAAHNPALS ELYRYFSGVV AAALQRNMAT VPRCQATFDL HGQILDAIEQ RDAERAKRLS RTLIES
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