Gene PputGB1_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0976 
Symbol 
ID5868736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1111845 
End bp1112495 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID641546077 
ProductGntR domain-containing protein 
Protein accessionYP_001667222 
Protein GI167031991 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.664678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAG AATTGACCAA GCGTTCCTTG GTGGAACTGG CGGTTGAACG TATGCGCGAA 
CGCATCGTTT TGGGCGACTG GCAGGTCGGC CAGCGCCTGC CGACCGAACC GGAACTGGCC
CTGCAGCTGG GCATCAGCCG TAACACCGTC CGTGAGGCCA TGCGCGTGCT GGCTTTCAGT
GGCTTGGTAG AAATCCGCCA GGGTGATGGC AGCTACCTGC GCACGGCCCA GGACCCGCTG
CAGGCGGTGC AGGCAATGTC GCGCTGCACC CCCGAGCAGG CCCGTGAAAC CCGCCATATC
CTCGAAACCG AGGCTATCGG CCTGGCGGCC TTGCGACGTA CCGACGCCGA CCTGCAGGCG
CTACGTGATG CCCTGGCAGG CAGTGCCGGG CACTTTCACG GGGATGTCGA TGCCTATGTG
ACGTGTGATC TGGTGTTTCA CCAACGGCTG GTCGATGCCG CCCACAACCC GGCGTTAAGC
GAGCTGTATC GTTACTTTTC CGGGGTGGTG GCTGCCGCGC TGCAGCGCAA CATGGCGACC
GTGCCACGCT GCCAGGCCAC GTTCGACCTG CATGGGCAGA TCCTCGACGC CATCGAGCAA
CGCGACGCGG AGCGGGCCAA GCGCCTGAGC CGTACCCTCA TCGAATCCTG A
 
Protein sequence
MSTELTKRSL VELAVERMRE RIVLGDWQVG QRLPTEPELA LQLGISRNTV REAMRVLAFS 
GLVEIRQGDG SYLRTAQDPL QAVQAMSRCT PEQARETRHI LETEAIGLAA LRRTDADLQA
LRDALAGSAG HFHGDVDAYV TCDLVFHQRL VDAAHNPALS ELYRYFSGVV AAALQRNMAT
VPRCQATFDL HGQILDAIEQ RDAERAKRLS RTLIES