Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0969 |
Symbol | |
ID | 5868729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1105331 |
End bp | 1105633 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546070 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001667215 |
Protein GI | 167031984 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGG CCGGTGTGAG CATGGCCGAG CCGGGCGTAC TGCGCCTGGC GGGTGTGCTG GACTACCGCA GCGGCCCGGC CTTGCGCAAG CAGGGCAAGG CGCTGATCGA CGGTTCTCGC GAGCCACGTC TGGTGCTTGA TTGCTCGGCT GTCGAGAAGT CGTCGAGTGT CGGCTTGTCG CTATTGCTTG CGTACATTCG CGACGCGCAG GCCACCGGCA AGGCGTGCGA GGTACGTGGC ATGCCCGACG ACATGCGGGA AATTGCCGGG GTCTATGACC TTGATGAAGT GCTGGCAACC TGA
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Protein sequence | MSEAGVSMAE PGVLRLAGVL DYRSGPALRK QGKALIDGSR EPRLVLDCSA VEKSSSVGLS LLLAYIRDAQ ATGKACEVRG MPDDMREIAG VYDLDEVLAT
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