Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0963 |
Symbol | |
ID | 5868723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1100826 |
End bp | 1101350 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546064 |
Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
Protein accession | YP_001667209 |
Protein GI | 167031978 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGG ACCTCATGCA ACGCGGCAAG AGCATCAAGC TCGCGGTATT CGACGTGGAC GGCGTGCTCA CCGACGGGCG CCTGTACTTC CTCGAGGACG GCAGCGAATT CAAGACCTTC AACACGCTCG ATGGCCAGGG CATCAAAATG CTCATGGCCT CGGGGGTGAC CACCGCCATC ATCAGCGGGC GCAAGACCCC GGTGGTCGAG CGTCGCGCCA AGAACCTCGG TATCCCGCAC CTGTATCAGG GGCGCGAGGA TAAATTGGTG GTGCTTGACG GCCTGCTCGC CGAACTGGGC CTAAGCTATG ATCAAGTGGC CTACCTGGGG GATGACCTGC CCGACCTGCC GGTGATTCGC CGGGTGGCAC TGGGCATGGC TGTAGCCAAC GCCGCACCGT TCGTACGCCA GCACGCTCAT GGCGTGACCC AGGCACGCGG TGGCGAAGGC GCGGCCCGTG AATTCTGCGA ACTGATCATG CAGGCCCAGG GCACCCTGGA CGCTGCCAAC GCCAACTACC TGTAA
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Protein sequence | MNQDLMQRGK SIKLAVFDVD GVLTDGRLYF LEDGSEFKTF NTLDGQGIKM LMASGVTTAI ISGRKTPVVE RRAKNLGIPH LYQGREDKLV VLDGLLAELG LSYDQVAYLG DDLPDLPVIR RVALGMAVAN AAPFVRQHAH GVTQARGGEG AAREFCELIM QAQGTLDAAN ANYL
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