Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0956 |
Symbol | |
ID | 5868716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1095617 |
End bp | 1096471 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546057 |
Product | hypothetical protein |
Protein accession | YP_001667202 |
Protein GI | 167031971 |
COG category | [R] General function prediction only |
COG ID | [COG1660] Predicted P-loop-containing kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.149336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA TCATTGTCAG CGGCCGGTCC GGCTCCGGCA AGAGCACTGC CCTCGATGTC CTGGAAGACA ACGGTTTCTA CTGCATCGAC AACCTGCCGG CCGGGCTGCT GCCGCAGTTG GCGGAAGACG CACTGATCAA CACCGAACTG CTGCAACCGA AGGTTGCCGT GTCGATCGAC GCACGCAACC TGCCCAGCCA CCTGACGCGC TTCCCCGAAT TGCTCGAAGA AGCCCGCGCG CGGAACATCC AGTGCGACGT GCTGTTTCTG GATGCCGACG AAGATATGCT GCTCAAGCGC TTCTCGGAAA CCCGCCGCCG CCACCCGCTG ACCAACGCCA ACCGCTCGCT CGCGGAAGCA ATCCGCGTGG AAAGCGATTT GCTGGGGCCG ATCGCCGACC TGGCCGACCT GAAAATCGAC ACCACCAACC TGAACCTGTA TCAGCTGCGT GACTCGATCA AGCTGCGCCT GCTCAACCAA CCCGAGCCTG GCACTGCGTT CCTGGTCGAG TCGTTCGGCT TCAAGCGCGG CATGCCGGTC GACGCCGACC TGGTGTTCGA TGTGCGCTGC CTGCCCAACC CCTACTGGAA GCCCGAGCTG CGAGAGCACT CGGGCCTCGA CCAGCCAGTG ATCGACTACC TGGCTGCCCA GCCGGATGTC GAAGACATGT ACAACGACAT TTCGGGCTAT CTGCTCAAGT GGTTGCCCCG CTTCGCCGCC AGCAACCGCG CTTATGTCAC CATTGCCATC GGCTGCACCG GCGGCCATCA CCGTTCGGTG TACATCACCG AGCGCCTTGG CCAACACCTG CAGCAAACCC TGAAAAACGT CCAGGTCCGC CACCGCGACC TCTAG
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Protein sequence | MRLIIVSGRS GSGKSTALDV LEDNGFYCID NLPAGLLPQL AEDALINTEL LQPKVAVSID ARNLPSHLTR FPELLEEARA RNIQCDVLFL DADEDMLLKR FSETRRRHPL TNANRSLAEA IRVESDLLGP IADLADLKID TTNLNLYQLR DSIKLRLLNQ PEPGTAFLVE SFGFKRGMPV DADLVFDVRC LPNPYWKPEL REHSGLDQPV IDYLAAQPDV EDMYNDISGY LLKWLPRFAA SNRAYVTIAI GCTGGHHRSV YITERLGQHL QQTLKNVQVR HRDL
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