Gene PputGB1_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0954 
Symbol 
ID5868714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1094386 
End bp1095279 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content64% 
IMG OID641546055 
Productzinc/iron permease 
Protein accessionYP_001667200 
Protein GI167031969 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.55549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCTG AGGTGATGTC TGTCAGCAGT GTGCGCCTGT TCCGCCTGGC GCTTGGGACC 
TTGCTGTTGC TGGCTGGCAC CGCGCTGCTG GTAGCGCGTG GCCTCGCCTG GCTGGACCTG
GAACCGCGCA TGCTGCGCGC CCTGGAGGGC GGTGCGTTAT GTGCACTGGG CACTGCACTG
GGCGCAGTAC CGGTACTGGT CATTCGCAAC ATGCCAGTGG CGCTGGCCGA CACGCTGCTG
GGTTTCGGCG CCGGTGTGAT GCTGGCAGCC ACCGCGTTTT CCCTGATCAT TCCGGGGTTG
GATGCCGCCC AGTCCATCGG GTTCAGCCCT TGGGGCGCGG GTGGCCTGAT CAGCTTCGGC
TTGTTGTTCG GTGCGCTGTG CCTGTTTCTG GTCGACCTCA AGGTGTCTGG CGCCTCGCCA
GAAGCGCTGG TTGGCACCGA CAATCAGCCG GTGATTGCTG CACGTATCTG GCTGTTTGTC
ATTGCCATCA TTGCGCACAA CATCCCTGAA GGCATGGCGA TTGGAGTGTC GGCCGGTGGC
GGCATGGCCG ACGCCGACAG CCTGGCCATG GGCATTGCGT TGCAGGATGT GCCTGAGGGG
CTGGTGATTG CGCTGGTGCT GGCCGGGGCG GGCATGCCGC GTTTCAAAGC CTTCCTGATA
GGCGCTGCGT CAGGGCTGGT CGAACCGGTG GCCGCAGTGA TCTGTGCCTG GCTGGTGAAT
GTTGCCGAAC TCCTGCTGCC GCTGGGTTTG GCCTGTGCGG CGGGGGCGAT GCTGCTAGTG
GTCACCCAGG AAATCATCCC GGAGTCGCGC AGCAATGGCC ACCATCGGCT GGCTAGCCTG
GGGTTGTGTA TCGGCTTCTG TCTGATGATG GTGATGGATA CCGCGATGTC CTGA
 
Protein sequence
MRSEVMSVSS VRLFRLALGT LLLLAGTALL VARGLAWLDL EPRMLRALEG GALCALGTAL 
GAVPVLVIRN MPVALADTLL GFGAGVMLAA TAFSLIIPGL DAAQSIGFSP WGAGGLISFG
LLFGALCLFL VDLKVSGASP EALVGTDNQP VIAARIWLFV IAIIAHNIPE GMAIGVSAGG
GMADADSLAM GIALQDVPEG LVIALVLAGA GMPRFKAFLI GAASGLVEPV AAVICAWLVN
VAELLLPLGL ACAAGAMLLV VTQEIIPESR SNGHHRLASL GLCIGFCLMM VMDTAMS