Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0948 |
Symbol | |
ID | 5868708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1089395 |
End bp | 1089916 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546049 |
Product | hypothetical protein |
Protein accession | YP_001667194 |
Protein GI | 167031963 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.30655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGATT CAAACAACGA CGCCTTCGAC GGCGAAAAAA GCAAAACCCA GATCAAGCGC GAACTGCATG AGCTGGTCGA ACTCGGTGAG CGCCTTACCA CGCTCAAAGC CGATACCCTG GCCCGCCTGC CGTTGACCGA CGAGCTGCGC AAGGCCCTGG CCGAGGCCAG CAAGCACACC GCTCATGGTG CCCGTAAACG CCACATGTCG TTTGTCGGCA AGCTCATGCG CGTGCAGGAC CTCGATGCCA TCCACGCCCT GCTCGAGCAG ATGGACAGCT CGAGCCGCCA GTACAACGAG CGTTTCCACA GCCTGGAGCG CTGGCGCGAC CGGCTGATCG ACGGCAACGA CGAGGACCTC GAGCGCTTCG TCAACGAGTA CCCCGACACC GACCGCCAGC AGCTGCGCTC ACTGGTGCGC CATGCCCAGC ACGAAAAGGC CCGGAACAAG CCGCCAGCCG CCGCGCGCAA GGTATTCAAG TACATCCGCG ACCTCGACGA GTTGCAGCGC GGGTTGCGCT GA
|
Protein sequence | MVDSNNDAFD GEKSKTQIKR ELHELVELGE RLTTLKADTL ARLPLTDELR KALAEASKHT AHGARKRHMS FVGKLMRVQD LDAIHALLEQ MDSSSRQYNE RFHSLERWRD RLIDGNDEDL ERFVNEYPDT DRQQLRSLVR HAQHEKARNK PPAAARKVFK YIRDLDELQR GLR
|
| |