Gene PputGB1_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0948 
Symbol 
ID5868708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1089395 
End bp1089916 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID641546049 
Producthypothetical protein 
Protein accessionYP_001667194 
Protein GI167031963 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.30655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATT CAAACAACGA CGCCTTCGAC GGCGAAAAAA GCAAAACCCA GATCAAGCGC 
GAACTGCATG AGCTGGTCGA ACTCGGTGAG CGCCTTACCA CGCTCAAAGC CGATACCCTG
GCCCGCCTGC CGTTGACCGA CGAGCTGCGC AAGGCCCTGG CCGAGGCCAG CAAGCACACC
GCTCATGGTG CCCGTAAACG CCACATGTCG TTTGTCGGCA AGCTCATGCG CGTGCAGGAC
CTCGATGCCA TCCACGCCCT GCTCGAGCAG ATGGACAGCT CGAGCCGCCA GTACAACGAG
CGTTTCCACA GCCTGGAGCG CTGGCGCGAC CGGCTGATCG ACGGCAACGA CGAGGACCTC
GAGCGCTTCG TCAACGAGTA CCCCGACACC GACCGCCAGC AGCTGCGCTC ACTGGTGCGC
CATGCCCAGC ACGAAAAGGC CCGGAACAAG CCGCCAGCCG CCGCGCGCAA GGTATTCAAG
TACATCCGCG ACCTCGACGA GTTGCAGCGC GGGTTGCGCT GA
 
Protein sequence
MVDSNNDAFD GEKSKTQIKR ELHELVELGE RLTTLKADTL ARLPLTDELR KALAEASKHT 
AHGARKRHMS FVGKLMRVQD LDAIHALLEQ MDSSSRQYNE RFHSLERWRD RLIDGNDEDL
ERFVNEYPDT DRQQLRSLVR HAQHEKARNK PPAAARKVFK YIRDLDELQR GLR