| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0945 |
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| Symbol | |
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| ID | 5868705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1083220 |
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| End bp | 1087035 |
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| Gene Length | 3816 bp |
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| Protein Length | 1271 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546046 |
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| Product | hypothetical protein |
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| Protein accession | YP_001667191 |
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| Protein GI | 167031960 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGTC TGACCCGCGT TCTTGTCGCC CTGACCCGCT GGGGGCTGGG CGTATGCGCC
CTGTTGGCGG TTTTGGTGGC GCTGTATGTC AGCCTCGGCC GCGAACTGGT GCCGCTGGTC
GCCGAGTACC GCGCCGATGT AGAGCGCAAG GCCGAGCAGG CGCTGGGCCT CCCTGTACAT
GTGGGTGCCT TGGAAGGCCG TTGGAGCGGG CTGGCACCGG TGCTGCGGGT GCGCGACCTG
CAATTGGGCG AAGGCGCCAC CGCGCTGCGC CTGGATGACG TGATGGTGGT GCCCGACGTC
TGGGCCAGCC TCACCGCCCG CGAAGTGCGC CTGGCACGCA TCCAGTTGGG CGGCTTGCAG
TTGATCCTGC GTGAGAACGA GCAGGGCGTC TGGGACCTCG AAGGCCTACC CAAGAAGGAC
GATGCGCCAT TGGACCCGGC CGACCTTTTG CAGCGCCTGC GCCAGCTAGG CCGCGTCGAT
GTATTCGACA GCCAGGTCAC CCTGCACCCC TGGCAGCGCG ACCCGCTTAC CCTGACTTAT
GTGAGCGCTG GCCTGCAGGC CGGCCCAGCA CGCCAGGCGG TGGACCTGCG GGCGACCTTG
CCTGACGGCC AGCCTCTGGC ACTCACCCTG CACAGCCGTA TGTCGGCCAA GGCCTGGCGC
GATGGCGAGG TCGAAGCTTA TCTGAGCCTG CCGCAAAGTG ACTGGTCGCA CTGGCTGCCG
CCAAGTCTGC TGGGACAGTG GCAAGCTGAC ACCCTGCGCG CAGGTGGTGA GTTCTGGGTC
GACTGGGGCA AAGGGCAGCT GCAGCAGGCC GTAGTACGGC TCAATGCGCC TGAGCTACAA
GGCGCCTATG CCGGACGAAA GGCCGCCAAG CTGGATAACC TGGCCTTGGG CGCCTGGTTC
CAGCGTCGCG AGCAGGGCTT CGATGTGGTG GTCGACTCGT TGGCCATGGA CATCGGCAAG
CGTCGCTGGG AGTCGCACCT GCAGTTGCAG CAGCGCCCTG GCCAGAGTGC TGCCGATGAA
AGCTGGCAGG TACAGGCTGA TCGTCTCGAC CTCACGCCGC TGACCCCGTT GATCGATGCC
TTGGCACCGC TGCCAGACAA CGTCATGGAC GTGGTAAATG GCTTGAAGGT GACCGGTGCG
CTGCGCAATG TGCGCCTCGA GGCCAGGCCC AAGGCCGAGG GTGATCAGCG CTTGCAGTTC
GCCGCCAACC TGGAGAAGGT GGGTTTTGAG GCTTATCACA GTGCGCCAGC CGCCGGTAAC
GTCAGTGGCA GCATCAGTGG TGACCTGGGC CACGGCGAGC TGCGCCTGGA TACCGATGCG
TTCATGCTGC ATCTGTACCC GATCTTCGCC AAACCCTGGC ACTACCAGAA GGCCAATGCA
CAGCTGACCT GGGCCTTGGA CAAAGACGGT TTCACCCTGA TCGCGCCGTA CCTCAAGGTG
CTGGGCGAAG AAGGCAAGAT CGCCGGTGAC TTCCTGATCC GCCTATTGTT CGAGGAAGGC
CGCGAGGATT ACATGGACCT GCGCGTCGGC CTGACCGAGG GCGATGGTCG CTATACCGCC
AAATACCTGC CCGAAGTGCT TAGCCCGGCG CTCGACGAGT GGCTGCGCAG CGCCATCGTC
AAAGGCGCGG TGGATGAAGG TTACTTCCAG TACCAGGGGT CGTTGAATCA TGGCGCGGTG
CCAGAGGCAC GCAGTATCAG CCTGTTCTTC AAGGTGCATG ACGCGGCCCT GGATTTCCAG
CCCGGTTGGC CGCAGGTGCA GCATGTGGAT GGCGATGTGT TCATCGAGGA CAGCGGCGTG
CGTATCAAGG CCCAGCGCGG TGTGTTGCTC GACACCAAAG TCAGCGATGT ACAGGTCGAT
ATTCCGCATG TCGAGGGTGA TCAGCACAGC CACCTTTACC TGGATGGCGA TTTCGACGGC
AGCCTGGGCG ATGGCCTGAA AATCCTCAAG GAAGCACCAA TCGGCACCGG TGAGATTTTC
GCCGGCTGGG AAGGTGAGGG GCCACTGAAG GGCAAGGTCA AACTCGACAT CCCGCTGGCC
CATGGGCAGC GGCCGAAAGT GCAGGTGGAC TTCGCCACCA GCGATGCGCG GCTGAAAGTC
GCCCCGCCGA GCCTGGAATT GAACCGCCTG AAGGGTGACT TCAGCTTCGA CTTCGACAAG
GGCCTGAGTG GCAAGGGCAT CAGCTTGCAG GCCTTCGGCA AGCCAGTGAC GGCGCAAATC
TCCGCTGAAG GCCAAGCGGG GCAGATGCAG ACCCGTATCA ATGCCAATGG CCAGGTATCG
CTCAAAGCGT TGACCGACTG GCTGCAGTTC ACCCCGTCCT TGCCGGCGTC CGGCGACCTG
CCGTACCAGT TGCAGCTGAG CCTGGGCAGC CGGGAAAACA GCCTGAGCGT CACCTCCAGC
CTCAAGGGCC TGGCGATCGA CCTGCCAGCG CCGTTCGGCA AAGCAGCGGC GGATACCCGC
GACAGCCGCT TCAGCATGAG CCTGCAAGGC CCGGAGCGGC GCTTCGATGC CTCCTATACC
GACCTTGCAC GTTTTGCCTA TGCCGCACCG GCCGACAAGC TGGCACAGGG CCGTGGCGAG
CTACTGTTGG GTACCGGTGA CGCCCAGCTA CCTGCCAGCC AAGGCCTGAG GGTGCGCGGG
CGTTTGGAGG CGCTGGACCT GGCTCCCTGG CAAGAACAGG CGGCCCGCCT GGCCGGTGAC
GACCCCGGTG GCAGTGCGCG GCAGAACCTG CAAAGCGTCG ACCTGAGCAT CGGCCAGTTG
AAAGCCTTCG GCATGGATCT GAATCAGGCT GTAGTGCGGC TGGCTCGAGG CGGCCCGGCC
TGGGATTTGC GCCTCGATAG CAAGGAAGTC ATCGGCAACG CCCGCGTACC GGATGCCAAG
GGCGCGCCAA TGGTCGTGCG CATGCAGACC TTGCGCCTGC CTGCCGCCAG CGCCGCAGAG
CAGCAGGCTG AAGAAGGCCC GGACCCGCTG GCCTCGTTCG ATCCGCGCAA GGTGCCGGCG
CTGGACCTGA GCATCGACAA GCTCTACCGC GGTGACGACC TGTTCGGCAG CGCCTCGATC
AAGCTGCGGC CGACTGCGCG TGGCGTTACC GCCAGCGACA TCGACCTTGA CTTCAAAGGC
TTGCGCATCG ATGGCGGTGG CGGCTGGGAA GGTGAAACCG GCAAAACCAG CAGCTGGTAC
AAAGGGCGTC TGGACGGCAA GAACCTGGCG GATGTGCTCA AGGCCTGGGG CTTCGCTCCC
ACCGTGACCA GCCGCGACTT CCGCCTGGAT GTAGATGGCC GCTGGCCGGG TTCGCCTGCC
GCGGTGAGCC TGACGCGTTT TTCGGGCAGC ATGGATGCGG CGCTGCGTAC GGGCCAATTC
GTCGAGGTTG AAGGCAGCGC CCAGGCACTG CGGGTGTTCG GCCTGCTCAA CTTCAACTCG
ATTGGCCGGC GCCTGCGTCT GGACTTCTCC GACCTGTTCG ACAAGGGCCT GGCCTATGAC
CGGGTCAAGG GTTTGCTGGT AGCCAGTAGC GGCGTGTACG TGACCCGCGA ACCGATCACC
GTGACCGGCC CATCGAGCAA CTTCGAGCTG GATGGCACGC TGGACATGGT GCGCGACCGG
GTGGATGCCA ACCTGCAGGT GAGCCTGCCG GTGACCAATA ATCTGCCGCT GGCGGCGCTG
ATCGTCGGCG CACCCGCTGT GGGCGGGGCG CTGTTCCTGG TCGATCGACT GATCGGTGAT
CGTGTGTCGC GCTTTGCCAG CGTTCACTAC CGTGTCGAAG GCCCGTGGAA AGAGCCTAGA
ATCACATTTG TGAAACCTTT CGAGAAATCC CGCTAG
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| Protein sequence | MGRLTRVLVA LTRWGLGVCA LLAVLVALYV SLGRELVPLV AEYRADVERK AEQALGLPVH
VGALEGRWSG LAPVLRVRDL QLGEGATALR LDDVMVVPDV WASLTAREVR LARIQLGGLQ
LILRENEQGV WDLEGLPKKD DAPLDPADLL QRLRQLGRVD VFDSQVTLHP WQRDPLTLTY
VSAGLQAGPA RQAVDLRATL PDGQPLALTL HSRMSAKAWR DGEVEAYLSL PQSDWSHWLP
PSLLGQWQAD TLRAGGEFWV DWGKGQLQQA VVRLNAPELQ GAYAGRKAAK LDNLALGAWF
QRREQGFDVV VDSLAMDIGK RRWESHLQLQ QRPGQSAADE SWQVQADRLD LTPLTPLIDA
LAPLPDNVMD VVNGLKVTGA LRNVRLEARP KAEGDQRLQF AANLEKVGFE AYHSAPAAGN
VSGSISGDLG HGELRLDTDA FMLHLYPIFA KPWHYQKANA QLTWALDKDG FTLIAPYLKV
LGEEGKIAGD FLIRLLFEEG REDYMDLRVG LTEGDGRYTA KYLPEVLSPA LDEWLRSAIV
KGAVDEGYFQ YQGSLNHGAV PEARSISLFF KVHDAALDFQ PGWPQVQHVD GDVFIEDSGV
RIKAQRGVLL DTKVSDVQVD IPHVEGDQHS HLYLDGDFDG SLGDGLKILK EAPIGTGEIF
AGWEGEGPLK GKVKLDIPLA HGQRPKVQVD FATSDARLKV APPSLELNRL KGDFSFDFDK
GLSGKGISLQ AFGKPVTAQI SAEGQAGQMQ TRINANGQVS LKALTDWLQF TPSLPASGDL
PYQLQLSLGS RENSLSVTSS LKGLAIDLPA PFGKAAADTR DSRFSMSLQG PERRFDASYT
DLARFAYAAP ADKLAQGRGE LLLGTGDAQL PASQGLRVRG RLEALDLAPW QEQAARLAGD
DPGGSARQNL QSVDLSIGQL KAFGMDLNQA VVRLARGGPA WDLRLDSKEV IGNARVPDAK
GAPMVVRMQT LRLPAASAAE QQAEEGPDPL ASFDPRKVPA LDLSIDKLYR GDDLFGSASI
KLRPTARGVT ASDIDLDFKG LRIDGGGGWE GETGKTSSWY KGRLDGKNLA DVLKAWGFAP
TVTSRDFRLD VDGRWPGSPA AVSLTRFSGS MDAALRTGQF VEVEGSAQAL RVFGLLNFNS
IGRRLRLDFS DLFDKGLAYD RVKGLLVASS GVYVTREPIT VTGPSSNFEL DGTLDMVRDR
VDANLQVSLP VTNNLPLAAL IVGAPAVGGA LFLVDRLIGD RVSRFASVHY RVEGPWKEPR
ITFVKPFEKS R
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