Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0944 |
Symbol | |
ID | 5868704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1081674 |
End bp | 1083131 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546045 |
Product | ribonuclease |
Protein accession | YP_001667190 |
Protein GI | 167031959 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAG AGATCCTGAT CAACATCACG CCGATGGAGT CACGTGTGGC GGTGGTGGAA AACGGGGTGC TGCAGGAAGT GCACGTCGAG CGCACCCAGC GCCGTGGCAT CGTCGGCAAT ATCTACAAGG GCAAGGTGGT ACGCGTGCTG CCGGGCATGC AGGCGGCCTT CGTCGACATC GGCCTGGAGC GCGCAGCGTT CATCCATGCC TCGGAAATTT CCCAGCGCGA AGGTTCGGCG GTAGAGAACA TCACCGCACT GGTACACGAA GGCCAGGCCC TTGTGGTGCA GGTGACCAAG GACCCGATCG GCACCAAGGG TGCACGCCTG ACCACTCAGC TGTCGATCCC GTCGCGCTAC CTGGTGTACA TGCCGCGCAG CAGCCATGTC GGTATTTCGC TGAAAATCGA GGACGAAGCC GAGCGCGAGC GCCTCAAGCA GGTGGTCAGC GATTGCATGG ACAGCGAGAA CATCAAGGAT GCCGGAGGGT TCATCCTGCG CACCGCAGCC GAGGGCGCGC GTGCCGAAGA AATCTTGCAG GACATCCGCT ACCTGCGCCG CCTGTGGGAG CAGATTGGCA CCCAGATCAA GACCTGCGGC GCGCCCACGG TCATCTACGA GGACCTGGGC CTGGCCCTGC GTACCCTGCG TGACCTGGTC AACCCGAAGA TCGAAAAGAT CCGCATCGAC TCGCGGGAAA CCTTCCAGAA AACCACGCAG TTCGTCGGCG AGCTGATGCC GGAAATCGCC GACCGCCTCG AACACTACCC AGGCGAGCGG CCTATCTTTG ACCTGTACGG CGTCGAAGAC GAGATCCAGC GTGCCCTGGA ACGCAAGGTG CCGCTGAAGT CCGGCGGCTA CCTGGTGGTC GACCCGGCCG AAGCGATGAC CACCATCGAC GTCAACACCG GGGCGTTCGT GGGCCATCGC AACCTCGAAG AAACCATCTT CAAGACCAAC CTCGAAGCCG CCACCGCCAT CGCCCGGCAA CTGCGCCTGC GCAACATTGG CGGCATCATC ATCATCGACT TCATCGACAT GGAAGACGAA GAGCACCAGC GCCAAGTGCT GCGGACCCTG GAAAAGCAGC TGGAGCGCGA CCACGCCAAG ACCAACATCA TCGGCATCAC CGAGCTGGGC CTGGTGCAGA TGACCCGCAA GCGTACGCGG GAAAGCCTGG AGCAGGTGCT GTGCGAGCCG TGCCTGGCCT GCCAGGGGCG CGGCAAGCTG AAGACTCCCG AGACCATCTG TTACGAAATC TTCCGCGAGA TCCTGCGCGA GGCCCGTGCC TATCAGGCCG AGGGTTACCG TGTGCTGGCC AACCAAAAGG TGGTCGATCG CCTGCTGGAT GAAGAATCGG GCAACGTGGC GGAACTGGAA GCCTTCATCG GCCGAACCAT TCGCTTCCAG GTCGAGTCGA TGTATTCGCA GGAACAATAC GACGTGGTGC TGCTCTGA
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Protein sequence | MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQRRGIVGN IYKGKVVRVL PGMQAAFVDI GLERAAFIHA SEISQREGSA VENITALVHE GQALVVQVTK DPIGTKGARL TTQLSIPSRY LVYMPRSSHV GISLKIEDEA ERERLKQVVS DCMDSENIKD AGGFILRTAA EGARAEEILQ DIRYLRRLWE QIGTQIKTCG APTVIYEDLG LALRTLRDLV NPKIEKIRID SRETFQKTTQ FVGELMPEIA DRLEHYPGER PIFDLYGVED EIQRALERKV PLKSGGYLVV DPAEAMTTID VNTGAFVGHR NLEETIFKTN LEAATAIARQ LRLRNIGGII IIDFIDMEDE EHQRQVLRTL EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLEQVLCEP CLACQGRGKL KTPETICYEI FREILREARA YQAEGYRVLA NQKVVDRLLD EESGNVAELE AFIGRTIRFQ VESMYSQEQY DVVLL
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