Gene PputGB1_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0941 
Symbol 
ID5868701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1079510 
End bp1080487 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID641546042 
Productrod shape-determining protein MreC 
Protein accessionYP_001667187 
Protein GI167031956 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTCG CGTTGATGGT TGTCGACGCG CGCTTCGACG TGCTCAAGCC CGTGCGCAGC 
CAGATGGGCC TGGTGCTGAT GGAATCGTAC TGGATCACCG ACTTGCCGCA GCGTGCCTGG
CAAGGTGTGG CCGGCCAGTT CGGCAGCCGC ACCGAGCTGA TAGCCGAAAA CGAGAAGCTC
AAGACCGAAG CCCTGCTGCT GCAGGGGCGC CTGCAGAAGC TGGCGGCCCT GACCGAGCAG
AACGTGCGGC TGCGCGAGCT GCTCAATTCA TCGGCCCTGG TCAACGAAAA GGTCGAAGTG
GCCGAGCTCA TCGGTGTGGA CCCCAACCCG TTCACCCACC GCATCCTGAT CAACAAGGGG
GAGCGTGATG GTGTGTTCCT GGGCCAGCCA GTGCTCGATG CCCGTGGCCT GATGGGCCAA
GTGGTCGAGT TGATGCCCTA CACCTCGCGG GTGCTGTTGC TGACCGATAC CACCCACAGC
ATTCCGGTGC AGGTCAACCG CAACGGCCTG CGTGCCATCG CCAGCGGCAC CGGCAACCCG
GAGCGCCTGG AGTTGCGCCA TGTGGCCGAC ACCGCCGACA TCAAGGAAGG CGACCTGCTG
GTCAGTTCCG GCATGGGGCA GCGCTTCCCG GCCGGTTACC CGGTGGCTAC GGTCAACGAA
GTGATCCACG ACTCCGGCCA GCCATTTGCC ATTGTCCGTG CCATCCCCAC CGCCGCACTC
AACCGCAGCC GCTATATGCT GCTGGTGTTC AGTGATCGGC GTAGCCCGGA GCAGCGTGCC
ACCGATGCCG CCATTGCCCA GGAAGAGGCC GACCGCAAGG GCAACGCGCC TGCTGGCCAG
CCGGCCGCTA CCGGCGAGCA GGCTGCACCT GCCGTGCCAG CCACCCCGGC AGCGCCGGCT
ACACCGCCCG CGCAGTCAGC AGCCCCAGCT GCTGCACCTG TCACGCCGGC CGCACCCGCT
CACACCCGGA GGCAATGA
 
Protein sequence
MSVALMVVDA RFDVLKPVRS QMGLVLMESY WITDLPQRAW QGVAGQFGSR TELIAENEKL 
KTEALLLQGR LQKLAALTEQ NVRLRELLNS SALVNEKVEV AELIGVDPNP FTHRILINKG
ERDGVFLGQP VLDARGLMGQ VVELMPYTSR VLLLTDTTHS IPVQVNRNGL RAIASGTGNP
ERLELRHVAD TADIKEGDLL VSSGMGQRFP AGYPVATVNE VIHDSGQPFA IVRAIPTAAL
NRSRYMLLVF SDRRSPEQRA TDAAIAQEEA DRKGNAPAGQ PAATGEQAAP AVPATPAAPA
TPPAQSAAPA AAPVTPAAPA HTRRQ