Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0939 |
Symbol | gatC |
ID | 5868699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1077753 |
End bp | 1078040 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546040 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
Protein accession | YP_001667185 |
Protein GI | 167031954 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.896613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTG AACGCTGCGA CGTGGAAAAG ATCGCCCATC TGGCCCGCCT GGGCCTCAAT GATGGCGAAC TGCCACGCAT TACCGACGCC CTGAACAGCA TTCTCGGCCT TGTAGACCAG ATGCAAGCGG TCGACACCAC TGGCATCGAG CCACTGGCCC ACCCGCTGGA GGCCAGCCAG CGCCTGCGCC CTGACCAGGT CACCGAAAGC AACCAGCGCG ACGCCTACCA GGCGATCGCA CCGTCGACCG AAAGCGGTCT GTACCTGGTT CCCAAAGTCA TCGAGTAA
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Protein sequence | MALERCDVEK IAHLARLGLN DGELPRITDA LNSILGLVDQ MQAVDTTGIE PLAHPLEASQ RLRPDQVTES NQRDAYQAIA PSTESGLYLV PKVIE
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