Gene PputGB1_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0938 
SymbolgatA 
ID5868698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1076286 
End bp1077737 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content66% 
IMG OID641546039 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001667184 
Protein GI167031953 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAT TTACCCTGGC CGAGATCGCC CGCGGACTCG CCGACAAATC GTTTTCTTCC 
GAAGAGCTGA CCCGCGCGCT GCTGGCGCGC ATCAAACAGC TCGACCCGCA GATCAACAGC
TTCATCAGCG TCACCGAAGA CCTGGCCCTG GGCCAGGCAC GTGCCGCCGA CGCCCGTCGC
GCCGCTGGCG AAACCGGCGC GCTGCTGGGG GCGCCGATCG CCCACAAAGA CCTGTTCTGC
ACCAACGGCG TACGCACCAG CTGCGGCTCG AAGATGCTCG ACAACTTCAA GGCGCCGTAT
GACGCCACCG TGGTCGCCAA GCTGGCCGAA GCCGGCATGG TCACCCTGGG CAAGACCAAC
ATGGACGAAT TCGCCATGGG TTCGGCCAAC GAGTCCAGCC ACTACGGCGC GGTGAAGAAC
CCGTGGAACC TCGAGCACGT ACCCGGCGGC TCGTCCGGTG GCTCGGCCGC TGCAGTGGCC
GCGCGCCTGC TGCCCGCCAC CACCGGTACC GACACCGGCG GCTCGATCCG CCAGCCAGCT
GCACTGACCA ACCTCACCGG CCTCAAGCCG ACGTACGGTC GTGTGTCGCG CTGGGGCATG
ATCGCCTACG CCTCCAGCCT CGACCAGGGC GGCCCGCTGG CCCGCACCGC CGAGGACTGC
GCCCTGCTGC TGCAAGGCAT GGCCGGTTTC GACGCCAAGG ACTCCACCAG CATCGAAGAG
CCGGTGCCGG ACTACAGCGC CAACCTGAAC GCTTCGCTGC AGGGCCTGCG CATCGGCCTG
CCGAAAGAGT ACTTTGGCGC AGGCCTCGAC CCACGCATCG CCGAACTGGT CCAGGCCAGC
GTCAAGGAGC TGGAAAAGCT CGGTGCGGTG GTCAAGGAAA TCAGCCTGCC GAACATGCAG
CACGCCATCC CGGCCTACTA CGTGATCGCC CCGGCTGAAG CCTCTTCCAA CCTGTCGCGC
TTCGACGGCG TGCGCTTCGG CTACCGCTGC GAGGAGCCCA AAGACCTCAC CGACCTGTAC
AAGCGTTCCC GCGGCGAAGG CTTCGGCGTT GAAGTACAGC GCCGCATCAT GGTCGGCACC
TACGCGCTGT CGGCGGGCTA CTACGACGCC TACTACGTGA AGGCGCAGCA AATCCGCCGC
CTGATCAAGA ACGACTTCAT GGCCGCCTTC AACGATGTCG ACCTGATCCT CGGCCCGACC
ACGCCAAACC CGGCCTGGAA GCTCGGCGCC AAGAGCAGCG ACCCGGTCGC CGCCTACCTG
GAAGACGTCT ACACCATCAA CGCCAACCTG GCGGGCCTGC CGGGCCTGTC GATGCCCGCT
GGCTTCGTCG ACGGCCTGCC AGTCGGCGTG CAACTGCTGG CGCCGTACTT CCAGGAAGGC
CGCTTGCTCA ACGTCGCGCA CCGCTACCAG CAAGTGACCG ACTGGCACAC CCGCGCCCCC
AACGGCTTCT GA
 
Protein sequence
MHQFTLAEIA RGLADKSFSS EELTRALLAR IKQLDPQINS FISVTEDLAL GQARAADARR 
AAGETGALLG APIAHKDLFC TNGVRTSCGS KMLDNFKAPY DATVVAKLAE AGMVTLGKTN
MDEFAMGSAN ESSHYGAVKN PWNLEHVPGG SSGGSAAAVA ARLLPATTGT DTGGSIRQPA
ALTNLTGLKP TYGRVSRWGM IAYASSLDQG GPLARTAEDC ALLLQGMAGF DAKDSTSIEE
PVPDYSANLN ASLQGLRIGL PKEYFGAGLD PRIAELVQAS VKELEKLGAV VKEISLPNMQ
HAIPAYYVIA PAEASSNLSR FDGVRFGYRC EEPKDLTDLY KRSRGEGFGV EVQRRIMVGT
YALSAGYYDA YYVKAQQIRR LIKNDFMAAF NDVDLILGPT TPNPAWKLGA KSSDPVAAYL
EDVYTINANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHRYQ QVTDWHTRAP
NGF