Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0938 |
Symbol | gatA |
ID | 5868698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1076286 |
End bp | 1077737 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641546039 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001667184 |
Protein GI | 167031953 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAAT TTACCCTGGC CGAGATCGCC CGCGGACTCG CCGACAAATC GTTTTCTTCC GAAGAGCTGA CCCGCGCGCT GCTGGCGCGC ATCAAACAGC TCGACCCGCA GATCAACAGC TTCATCAGCG TCACCGAAGA CCTGGCCCTG GGCCAGGCAC GTGCCGCCGA CGCCCGTCGC GCCGCTGGCG AAACCGGCGC GCTGCTGGGG GCGCCGATCG CCCACAAAGA CCTGTTCTGC ACCAACGGCG TACGCACCAG CTGCGGCTCG AAGATGCTCG ACAACTTCAA GGCGCCGTAT GACGCCACCG TGGTCGCCAA GCTGGCCGAA GCCGGCATGG TCACCCTGGG CAAGACCAAC ATGGACGAAT TCGCCATGGG TTCGGCCAAC GAGTCCAGCC ACTACGGCGC GGTGAAGAAC CCGTGGAACC TCGAGCACGT ACCCGGCGGC TCGTCCGGTG GCTCGGCCGC TGCAGTGGCC GCGCGCCTGC TGCCCGCCAC CACCGGTACC GACACCGGCG GCTCGATCCG CCAGCCAGCT GCACTGACCA ACCTCACCGG CCTCAAGCCG ACGTACGGTC GTGTGTCGCG CTGGGGCATG ATCGCCTACG CCTCCAGCCT CGACCAGGGC GGCCCGCTGG CCCGCACCGC CGAGGACTGC GCCCTGCTGC TGCAAGGCAT GGCCGGTTTC GACGCCAAGG ACTCCACCAG CATCGAAGAG CCGGTGCCGG ACTACAGCGC CAACCTGAAC GCTTCGCTGC AGGGCCTGCG CATCGGCCTG CCGAAAGAGT ACTTTGGCGC AGGCCTCGAC CCACGCATCG CCGAACTGGT CCAGGCCAGC GTCAAGGAGC TGGAAAAGCT CGGTGCGGTG GTCAAGGAAA TCAGCCTGCC GAACATGCAG CACGCCATCC CGGCCTACTA CGTGATCGCC CCGGCTGAAG CCTCTTCCAA CCTGTCGCGC TTCGACGGCG TGCGCTTCGG CTACCGCTGC GAGGAGCCCA AAGACCTCAC CGACCTGTAC AAGCGTTCCC GCGGCGAAGG CTTCGGCGTT GAAGTACAGC GCCGCATCAT GGTCGGCACC TACGCGCTGT CGGCGGGCTA CTACGACGCC TACTACGTGA AGGCGCAGCA AATCCGCCGC CTGATCAAGA ACGACTTCAT GGCCGCCTTC AACGATGTCG ACCTGATCCT CGGCCCGACC ACGCCAAACC CGGCCTGGAA GCTCGGCGCC AAGAGCAGCG ACCCGGTCGC CGCCTACCTG GAAGACGTCT ACACCATCAA CGCCAACCTG GCGGGCCTGC CGGGCCTGTC GATGCCCGCT GGCTTCGTCG ACGGCCTGCC AGTCGGCGTG CAACTGCTGG CGCCGTACTT CCAGGAAGGC CGCTTGCTCA ACGTCGCGCA CCGCTACCAG CAAGTGACCG ACTGGCACAC CCGCGCCCCC AACGGCTTCT GA
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Protein sequence | MHQFTLAEIA RGLADKSFSS EELTRALLAR IKQLDPQINS FISVTEDLAL GQARAADARR AAGETGALLG APIAHKDLFC TNGVRTSCGS KMLDNFKAPY DATVVAKLAE AGMVTLGKTN MDEFAMGSAN ESSHYGAVKN PWNLEHVPGG SSGGSAAAVA ARLLPATTGT DTGGSIRQPA ALTNLTGLKP TYGRVSRWGM IAYASSLDQG GPLARTAEDC ALLLQGMAGF DAKDSTSIEE PVPDYSANLN ASLQGLRIGL PKEYFGAGLD PRIAELVQAS VKELEKLGAV VKEISLPNMQ HAIPAYYVIA PAEASSNLSR FDGVRFGYRC EEPKDLTDLY KRSRGEGFGV EVQRRIMVGT YALSAGYYDA YYVKAQQIRR LIKNDFMAAF NDVDLILGPT TPNPAWKLGA KSSDPVAAYL EDVYTINANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHRYQ QVTDWHTRAP NGF
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