| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0937 |
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| Symbol | gatB |
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| ID | 5868697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1074829 |
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| End bp | 1076274 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546038 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001667183 |
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| Protein GI | 167031952 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.75121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATGGG AAGTTGTGAT CGGGCTGGAA ATCCACACTC AGCTCGCCAC CCAGTCGAAG
ATTTTCTCCG GCAGCGCCAC CACCTTTGGC TCCGAGCCGA ACACCCAGGC CAGCCTGGTT
GACCTGGGCA TGCCCGGTGT ACTGCCGGTG CTGAACCAGG AAGCCGTGCG CATGGCGTGC
ATGTTCGGCC TGGCCATCGA CGCCGAAATC GGCAAGCGCA ACGTGTTCGC GCGCAAGAAC
TACTTCTACC CGGACCTGCC CAAGGGCTAC CAGATCAGCC AGATGGACCT GCCGATCGTC
GGCAAGGGCC ACCTGGACAT CGCCCTGGAA GACGGCACCA TCAAGCGCAT CGGCGTAACC
CGTGCGCACC TGGAAGAAGA CGCCGGCAAG AGCCTGCACG AAGACTTCAG CGGCTCCACC
GGCATCGACT TGAACCGTGC CGGCACGCCA CTGCTGGAAA TCGTCTCCGA GCCTGACATG
CGCAGCGCCA AGGAAGCCGT GGCTTACGTC AAGGCGATCC ACGCGCTGGT ACGTTACCTG
GGCATCTGCG ATGGCAACAT GGCCGAAGGT TCGCTGCGTT GCGACTGCAA CGTGTCGATC
CGCCCGAAAG GCCAGACCGA GTTCGGCACC CGCTGCGAGA TCAAGAACGT CAACTCGTTC
CGCTTCATAG AGCGCGCGAT CAACAGCGAA ATCCAACGCC AGATCGACTT GATCGAAGAC
GGCGGCAAGG TGGTGCAGGA AACCCGCCTG TACGACCCGA ACAAAGACGA AACCCGCTCC
ATGCGCAGCA AGGAGGAAGC CAACGACTAT CGCTACTTCC CCGACCCGGA CCTGCTGCCG
GTGGTGATCG AGGACAGCTT CCTCGACACC ATTCGCGCCG GCCTGCCAGA GCTGCCGCCA
CAGAAAGTCG AGCGTTTCCA GAGCCAGTAC GGCCTGTCGG CATACGACGC CAACGTGTTG
GCCTCCAGCC GCGAACAGGC AGATTACTTC GAAGAAGTAG TGAAGATCGG TGGCGACGCC
AAGCTGGCGG CCAACTGGGT CATGGTCGAA CTGGGCAGCC TGCTGAACAA GCTGGGTGTC
GAAATCGACC AGGCGCCGGT CAGCGCCGCG CAACTGGGCG GCATGCTGCT GCGCATTCGC
GACAACACCA TCAGCGGCAA AATCGCCAAG ACCGTGTTCG AGGCCATGGC CGCCGGTGAA
GGCGATGCCG ACAGCATCAT CGACAGCAAG GGCCTGAAAC AGGTTACCGA CACCGGTGCG
ATCGACAAGA TGCTCGACGA AATGCTGGCA GCCAATGCCG AGCAGGTCGA ACAGTACCGC
GCAGCCGATG AGGCCAAACG CGGCAAGATG TTCGGCTTCT TCGTCGGCCA GGCCATGAAA
GCTTCCAAAG GCAAGGCCAA CCCGGGGCAG GTGAACCAAT TGCTCAAAGC CAAGCTCGAA
GGGTGA
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| Protein sequence | MQWEVVIGLE IHTQLATQSK IFSGSATTFG SEPNTQASLV DLGMPGVLPV LNQEAVRMAC
MFGLAIDAEI GKRNVFARKN YFYPDLPKGY QISQMDLPIV GKGHLDIALE DGTIKRIGVT
RAHLEEDAGK SLHEDFSGST GIDLNRAGTP LLEIVSEPDM RSAKEAVAYV KAIHALVRYL
GICDGNMAEG SLRCDCNVSI RPKGQTEFGT RCEIKNVNSF RFIERAINSE IQRQIDLIED
GGKVVQETRL YDPNKDETRS MRSKEEANDY RYFPDPDLLP VVIEDSFLDT IRAGLPELPP
QKVERFQSQY GLSAYDANVL ASSREQADYF EEVVKIGGDA KLAANWVMVE LGSLLNKLGV
EIDQAPVSAA QLGGMLLRIR DNTISGKIAK TVFEAMAAGE GDADSIIDSK GLKQVTDTGA
IDKMLDEMLA ANAEQVEQYR AADEAKRGKM FGFFVGQAMK ASKGKANPGQ VNQLLKAKLE
G
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