Gene PputGB1_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0933 
Symbol 
ID5868693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1071396 
End bp1072754 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content62% 
IMG OID641546034 
Productamino acid permease-associated region 
Protein accessionYP_001667179 
Protein GI167031948 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACC AGAGCACGCC CGAGCGGTTA CAGCGCGGGC TGAAGAATCG CCATATCCAG 
CTGATCGCGC TGGGCGGGGC CATCGGTACC GGGTTGTTTC TGGGCATCGC CCAGACCATC
CAGCTGGCCG GCCCCTCCGT GCTGCTGGGC TATGCCATCG CCGGTCTGAT GGCCTTTCTG
ATCATGCGCC AGTTGGGCGA AATGGTCGTG GAAGAGCCGG TCGCCGGTAG TTTCAGCCAC
TTCGCCCACC AGTACTGGAG CGAGTTCGCC GGCTTCGTTT CGGGGTGGAA TTACTGGGTG
GTGTACGTGC TGGTCGGCAT GGCCGAACTG ACGGCGGTCG GCATCTACGT GCAGTACTGG
TGGCCGGAGT TTCCTACCTG GGCCACCGCG GCGATCTTCT TCGTGGCGAT CAACCTGATC
AACCTGACGC AGGTGAAGGT CTACGGCGAG ATGGAGTTCT GGTTCGCCCT GGTCAAGGTG
GTGGCCATCG TCAGCATGAT CGGCTTTGGC GCCTGGCTGT TGAGCAGCGG CCATGGCGGC
CCGGATGCCA GCGTGGCCAA CCTGTGGCAG TACGGCGGCT TCTTCCCTAA CGGCGTCAGC
GGCTTGGTGA TGGCCTTGGC GGTGATCATG TTCTCGTTCG GCGGCCTGGA GCTGGTGGGT
ATCACCGCCG CCGAAGCCGA CAACCCCCGC CAGAGCATCC CCAAAGCCAC CAACCAAGTG
GTGTACCGCA TCCTGATCTT CTACATCGGT GCCTTGGCGG TGCTGTTGTC GCTGTACCCG
TGGCAGAAGG TAGTGCAGGG CGGTAGCCCG TTCGTGATGA TCTTCCATGA GCTGGACAGC
GACCTGGTGG CGACCATCCT CAATATCGTG GTGCTGACGG CTGCGCTGTC GGTGTACAAC
AGCTGTGTGT ACGCCAACAG CCGCATGCTG TTCGGCCTGG CTAGCCAAGG TGATGCGCCG
CGCCAGCTGC TGAAGGTAAG CCGCAGCGGT GTACCGCTGA CCGCGCTGGG CGTGTCGGCC
TTCGCGACCG GCCTGTGCGT GCTGATCAAC TACCTGATGC CGGGCGAGGC CTTTGGCTTG
CTGATGGCGC TGGCGGTGTC GGCGCTGGTG ATCAACTGGG CGAGCATCAG CATTACTCAC
CTGAAATTCC GCAAGGCCAA GCTGGCTGCC GGCATCATCC CCTTCTACAA AAGCCTGGGG
CACCCGCTGA CCAACTACCT GTGTCTGGCG TTCATCGTGC TGATATTGGT GGTGATGTAC
CTGACCCCGC CGATTCGCAT CTCGGTGATG CTGATCCCGG CTTGGATTGC CGTACTGTGG
GTGGCCTTCA AGCTGAAGAA GGCTCGCCAG GCCAAATAG
 
Protein sequence
MQDQSTPERL QRGLKNRHIQ LIALGGAIGT GLFLGIAQTI QLAGPSVLLG YAIAGLMAFL 
IMRQLGEMVV EEPVAGSFSH FAHQYWSEFA GFVSGWNYWV VYVLVGMAEL TAVGIYVQYW
WPEFPTWATA AIFFVAINLI NLTQVKVYGE MEFWFALVKV VAIVSMIGFG AWLLSSGHGG
PDASVANLWQ YGGFFPNGVS GLVMALAVIM FSFGGLELVG ITAAEADNPR QSIPKATNQV
VYRILIFYIG ALAVLLSLYP WQKVVQGGSP FVMIFHELDS DLVATILNIV VLTAALSVYN
SCVYANSRML FGLASQGDAP RQLLKVSRSG VPLTALGVSA FATGLCVLIN YLMPGEAFGL
LMALAVSALV INWASISITH LKFRKAKLAA GIIPFYKSLG HPLTNYLCLA FIVLILVVMY
LTPPIRISVM LIPAWIAVLW VAFKLKKARQ AK