Gene PputGB1_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0930 
Symbol 
ID5868690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1068426 
End bp1069682 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content64% 
IMG OID641546031 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001667176 
Protein GI167031945 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTG CCGTACAACC GTTGTCCGCT ACCCGTCAGA ACCTCTGGCG CCTGACCGTC 
ATTCGGGTCC TGGTCCTGGC TGCCCAGGCT GGCTCGGTGG GCGTTGCCTA CTGGACCGAA
CTGCTGCCGT TGCCCTGGCT GTCGCTGGCC GGCACCTTGG CCTTGTCTTC GCTGCTGTGT
GCCTTCACGG CCCTGCGCCT GCGCTTGTCG CTGCCCGTCA CCGAAATGGA GTATGCCCTG
CAGCTGGCTT GTGACCTGCT GATCCACAGC GCCTTGCTGT ATTACTCCGG CGGTTCGACC
AACCCGTTCG TTTCGTATTA CCTGGTGCCG CTGGCGATTG CTGCGGTGAC CTTGCCGTGG
CTGTATTCGC TGATCCTGTC TGGCATCGCC CTGACGGCCT ACAGCCTGCT GCTGGTGCAG
TTCTACCCGC TCGAAGGCTT GCCCATGGCG CGGGACAAGA TGCAGGTCTA CGGCATGTGG
CTGAGTATTG CCCTGGCGGC GGCCGTGATC ACCTTCTTTG CCGCGCGCAT GGCCGAAGAG
CTGCGCCGCC AGGAGCAGCT GCGTTCCGAA CGGCGTGAAG AAAGCCTGCG CGACGAGCAG
TTGCTGGCCG TGGCCACCCA GGCTGCCGGT GCCGCCCATG AGCTGGGTAC GCCGCTGGCG
ACCATGAGCG TGCTGATCAA CGAAATGCGC CAGGACCATA CCGACCCGCT GTTGCAGGAG
GACCTGCAGA TCCTCCAGGA CCAGGTAAAG CTGTGCAAGG AAACCTTGCA ACAGCTGGTG
CGCGCTGCCG AAGCCAACCG ACGCCTGGCG ATCGTCGAGC AGGATGTGAC AGCATGGCTG
GACGAAGCGC TGAACCGCTG GCACCTGATG CGCCCGGAAG CCAGTTACCG CTTCCAGCGT
CTGCGCGACG GCAAGGTGCC TCGGTTGACA CCGCCACCGG ACCTTACCCA GGCGCTGCTG
AACCTGTTGA ACAATGCTGC CGATGCCTGC CCCGATGACC TGGAAGTGCG CCTTGACTGG
GACGCCCAGG ACATCGTCAT CAGCATCCGC GACCACGGCC CCGGCGTGCC GCCGGCCATT
GCCGAAGCCA TCGGCAAACC CTTCATTACC ACCAAGGGCA AAGGCTTCGG CCTGGGCCTG
TTCTTGAGCA AGGCCAGCGT GACCCGTGCG GGCGGTTCGG TAAAACTCTA TAGTCATGAA
CAGGGTGGCA CCCTGACCGA ACTGCGCCTG CCCTATGGCA AGCGAGGAGA TGAATGA
 
Protein sequence
MLAAVQPLSA TRQNLWRLTV IRVLVLAAQA GSVGVAYWTE LLPLPWLSLA GTLALSSLLC 
AFTALRLRLS LPVTEMEYAL QLACDLLIHS ALLYYSGGST NPFVSYYLVP LAIAAVTLPW
LYSLILSGIA LTAYSLLLVQ FYPLEGLPMA RDKMQVYGMW LSIALAAAVI TFFAARMAEE
LRRQEQLRSE RREESLRDEQ LLAVATQAAG AAHELGTPLA TMSVLINEMR QDHTDPLLQE
DLQILQDQVK LCKETLQQLV RAAEANRRLA IVEQDVTAWL DEALNRWHLM RPEASYRFQR
LRDGKVPRLT PPPDLTQALL NLLNNAADAC PDDLEVRLDW DAQDIVISIR DHGPGVPPAI
AEAIGKPFIT TKGKGFGLGL FLSKASVTRA GGSVKLYSHE QGGTLTELRL PYGKRGDE