Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0930 |
Symbol | |
ID | 5868690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1068426 |
End bp | 1069682 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546031 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001667176 |
Protein GI | 167031945 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCTG CCGTACAACC GTTGTCCGCT ACCCGTCAGA ACCTCTGGCG CCTGACCGTC ATTCGGGTCC TGGTCCTGGC TGCCCAGGCT GGCTCGGTGG GCGTTGCCTA CTGGACCGAA CTGCTGCCGT TGCCCTGGCT GTCGCTGGCC GGCACCTTGG CCTTGTCTTC GCTGCTGTGT GCCTTCACGG CCCTGCGCCT GCGCTTGTCG CTGCCCGTCA CCGAAATGGA GTATGCCCTG CAGCTGGCTT GTGACCTGCT GATCCACAGC GCCTTGCTGT ATTACTCCGG CGGTTCGACC AACCCGTTCG TTTCGTATTA CCTGGTGCCG CTGGCGATTG CTGCGGTGAC CTTGCCGTGG CTGTATTCGC TGATCCTGTC TGGCATCGCC CTGACGGCCT ACAGCCTGCT GCTGGTGCAG TTCTACCCGC TCGAAGGCTT GCCCATGGCG CGGGACAAGA TGCAGGTCTA CGGCATGTGG CTGAGTATTG CCCTGGCGGC GGCCGTGATC ACCTTCTTTG CCGCGCGCAT GGCCGAAGAG CTGCGCCGCC AGGAGCAGCT GCGTTCCGAA CGGCGTGAAG AAAGCCTGCG CGACGAGCAG TTGCTGGCCG TGGCCACCCA GGCTGCCGGT GCCGCCCATG AGCTGGGTAC GCCGCTGGCG ACCATGAGCG TGCTGATCAA CGAAATGCGC CAGGACCATA CCGACCCGCT GTTGCAGGAG GACCTGCAGA TCCTCCAGGA CCAGGTAAAG CTGTGCAAGG AAACCTTGCA ACAGCTGGTG CGCGCTGCCG AAGCCAACCG ACGCCTGGCG ATCGTCGAGC AGGATGTGAC AGCATGGCTG GACGAAGCGC TGAACCGCTG GCACCTGATG CGCCCGGAAG CCAGTTACCG CTTCCAGCGT CTGCGCGACG GCAAGGTGCC TCGGTTGACA CCGCCACCGG ACCTTACCCA GGCGCTGCTG AACCTGTTGA ACAATGCTGC CGATGCCTGC CCCGATGACC TGGAAGTGCG CCTTGACTGG GACGCCCAGG ACATCGTCAT CAGCATCCGC GACCACGGCC CCGGCGTGCC GCCGGCCATT GCCGAAGCCA TCGGCAAACC CTTCATTACC ACCAAGGGCA AAGGCTTCGG CCTGGGCCTG TTCTTGAGCA AGGCCAGCGT GACCCGTGCG GGCGGTTCGG TAAAACTCTA TAGTCATGAA CAGGGTGGCA CCCTGACCGA ACTGCGCCTG CCCTATGGCA AGCGAGGAGA TGAATGA
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Protein sequence | MLAAVQPLSA TRQNLWRLTV IRVLVLAAQA GSVGVAYWTE LLPLPWLSLA GTLALSSLLC AFTALRLRLS LPVTEMEYAL QLACDLLIHS ALLYYSGGST NPFVSYYLVP LAIAAVTLPW LYSLILSGIA LTAYSLLLVQ FYPLEGLPMA RDKMQVYGMW LSIALAAAVI TFFAARMAEE LRRQEQLRSE RREESLRDEQ LLAVATQAAG AAHELGTPLA TMSVLINEMR QDHTDPLLQE DLQILQDQVK LCKETLQQLV RAAEANRRLA IVEQDVTAWL DEALNRWHLM RPEASYRFQR LRDGKVPRLT PPPDLTQALL NLLNNAADAC PDDLEVRLDW DAQDIVISIR DHGPGVPPAI AEAIGKPFIT TKGKGFGLGL FLSKASVTRA GGSVKLYSHE QGGTLTELRL PYGKRGDE
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