| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0927 |
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| Symbol | |
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| ID | 5868687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1063814 |
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| End bp | 1065406 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546028 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001667173 |
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| Protein GI | 167031942 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCACG CTACCCGCCT TTCGACCCTA TTGGCCCTGG GCCTGATCAG CCAGTCCCCG
GCCCTGCTGG CCAACAACCT GGTGTTCTGC TCCGAGGGCA GCCCAGCCGG CTTCGACACC
GCTCAGTACA CCAGCGCCAC CGACAACGAC GCCGCCGAAC CCATCTACAA CCGGCTGGTC
GAGTTCGAAC GGGGTGGCAC CGCCGTGCAG CCTGCCCTGG CAACTCGCTG GGAAGTGTCC
GACGACGGCC TGCGCTACAC CTTCCACCTG CGTGAAGGGG TGAAATTCCA CAGCAACAAG
GCCTTCAACC CAAGCCGCGA GTTCAACGCC GACGATGTGT TGTTCACCTT CAACCGCATG
CTCGACAAGG GTCACCGGTT CCGCCAGGCC TACCCTACCG AGTTCCCCTA TTTCATCAGC
ATGGGCCTGG ACAAGAATAT CGCTAGCATC GAGAAGGCCG GCCCGCTGAC CGTGGTGTTC
ACCTTGAACA CGGTCGATGC TGCGTTCATC CAGAACCTGG CCATGAGCTT CGCCTCCATC
CTCTCCGCCG AGTACGCCGA CCAGTTGCTG GCCAGCGGGC GCCCCAGCGA CATCAACCAG
CAGCCGATCG GTACCGGGCC GTTCGTGTTC CAGCGATACC AGAAGGATTC GCAGATCCGC
TACAAGGGCA ACAAGGACTA TTGGGCACCG AATGAGGTGA AGATCGACAA CCTGGTGTTC
TCGATCAACG TCGACCCCTC GGTGCGCATC CAGAAGCTGC GCCGCAATGA GTGCCAGGTC
ACCCTGCACC CGCGCCCGGC CGACCTGCCG GCGCTCAAGG CCGACAGCAC GTTGCAGGTG
TTGCAGCAAC CAGGCTTCAA CCTCGGCTAC ATCGCCTACA ACACCCAGCA CCCACCATTC
GACCGCCTGG AAGTGCGCCA GGCAATGGAC ATGGCGGTGA ACAAGCAAGC CATCATCCAG
GCGGTGTATC AGGACTCCGG CCAACTGGCG GTGAACGCCA TGCCACCCAC CCAGTGGTCC
TATGACGAAA GCCTCAAGGA CGCCCCCTAC AACCCGGAAA AGGCCAGACA GCTGCTGCAG
CAGGCCGGTG TCAAACCTGG CACCGAGGTC ACCCTGTGGG CCATGCCGGT GCAGCGCCCA
TACAACCCCA ACGCCAAGCT GATGGCCGAA ATGCTTCAGG CCGACTGGAA CAAGCTCGGC
TTCAAGGTAC GCATCGTCAG CTATGAATGG GGCGAATACC TCAAGCGCAT GAAAAGCGGC
GAGCACGACA TCGCCCTGAT CGGCTGGACC GGTGACAACG GCGACCCGGA CAACTGGCTG
GGCACCCTCT ACAGCTGCGA TGCCATCGGC AGCAACAACT ATTCGCTGTG GTGCGACCCG
CAGTACGACA GCCTGGTCAA GCAGGCCAAG CAGGTGACCG ACCGTACGCA GCGCACCGCC
CTGTACCAGC AGGCCCAGCA GCGGCTCAAG CAGCAGGTAC CGATTACCCC GGTGGCGCAT
TCCACGGTGA ACCAACCGCT CAGCGTCAAG GTTTCCGAAT TCAAGGTCAG CCCGTTTGGG
CGCAATGACT TTTCCGGTGT GAGTGTTGAC TGA
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| Protein sequence | MRHATRLSTL LALGLISQSP ALLANNLVFC SEGSPAGFDT AQYTSATDND AAEPIYNRLV
EFERGGTAVQ PALATRWEVS DDGLRYTFHL REGVKFHSNK AFNPSREFNA DDVLFTFNRM
LDKGHRFRQA YPTEFPYFIS MGLDKNIASI EKAGPLTVVF TLNTVDAAFI QNLAMSFASI
LSAEYADQLL ASGRPSDINQ QPIGTGPFVF QRYQKDSQIR YKGNKDYWAP NEVKIDNLVF
SINVDPSVRI QKLRRNECQV TLHPRPADLP ALKADSTLQV LQQPGFNLGY IAYNTQHPPF
DRLEVRQAMD MAVNKQAIIQ AVYQDSGQLA VNAMPPTQWS YDESLKDAPY NPEKARQLLQ
QAGVKPGTEV TLWAMPVQRP YNPNAKLMAE MLQADWNKLG FKVRIVSYEW GEYLKRMKSG
EHDIALIGWT GDNGDPDNWL GTLYSCDAIG SNNYSLWCDP QYDSLVKQAK QVTDRTQRTA
LYQQAQQRLK QQVPITPVAH STVNQPLSVK VSEFKVSPFG RNDFSGVSVD
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