| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0925 |
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| Symbol | |
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| ID | 5868685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1060516 |
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| End bp | 1062126 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641546026 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001667171 |
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| Protein GI | 167031940 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGAG CTTTCATGAA ATCGCTACCG CTACGCCTGG CCCTGGCCGC CCTGGTGCTG
GGCAGCACCA CGCAACTGGC CGCCAAACCA CTGGTGGTGT GTACCGAGGC CAGCCCGGAA
GGGTTCGACG TTGTTCAGTA CACCACGGCG GTCACTTTCG ACGCATCGTC CGAAACCGTG
TTCAACCGCC TGGTCGATTT CAAGCCCGGC ACCACCGACA TCCAGCCGGC ACTGGCCGAA
CGCTGGGACA TTTCGCCAGA CGGCCTGACC TACACCTTCC ACCTGCGTCA CGGGGTGAAG
TTCCACACCA CCGACTACTT CAAGCCAACT CGCGAATTCA ATGCCGACGA TGTGCTGTGG
AGCCTGAATC GCCAGCTTGA CCCGAATCAC CCATGGCATG ACAAGACCAG CGTGGGCTAT
CCCTACTTTG AAAGCATGGC CTTCAAGGAA CTGCTCAAGT CTGTGAGCAA GAGCGACGAC
AACACCGTGA TGATCACCCT CACCCGCCCG GAAGCCCCGT TCCTGCATGA CATGGCAATG
GGCTTCACCT CGATCTATTC CGCCGAGTAC GGCGACAAGT TGCTCGAAGC TGGCAAAACG
GCCGAGCTGA ACAGCAAGCC GATCGGCACT GGGCCGTTCA TCTTCCAGCG CTACAACAAG
GATGCACAGG TCCGTTTCAA ACCGAATCCC GAATACTTCC GCGGCAAACC ACCCGCCGAT
GCCCTGGTCT TCGCCATCGC TACCGATAGC AACGTACGAC TGCAAAAGCT ACGCGCCAAC
GAATGCCAGG TCGCGCTCTA CCCCAAACCG GATGATGTGC CGTCGATCAA GGCTGACCCC
AAGCTCAAGG TGGCCGAGAT CGAAGCGCTG GTCACCGGTT ACATCGCCAT GAATACCGAG
CACCCATACC TGAGCGATGT GCGCGTGCGC AAAGCCATCA ACATGGCCTT CGATCGCCAG
ACCCACGTCG ATCAGCTGTT TGGCAAGGGC AACGCGCTAG TGGGCGTCAA TCCATACCCG
CCGACCATGA TCGGTTACAA CACCAGTAAC AAGAACCCGC CGCGCGACCT CGACAAAGCA
CGCGCCCTGC TCAAGGAAGC TGGCGTTCCG GAAGGCACGG TGATCACGCT GTTCACCCGC
AACGGTGGCG GCATGACCAA CCCTAACCCG CGCCTGTCCG CCGAGATGTT ACAGGCCGAC
CTGAAACAGA TCGGGCTGAA GCTGGATGTC CGCGTGATGG AGTGGGCGGA AATGCTGCGC
CGCGCCAAGA AGGGCGAAGC GGACCTGGTG TCCACCGGCT GGGCAGGCGA CAACGGTGAC
CCGGATAACT TCCTTACCCC GCTGCTCAGC TGTGACGCGG CCAAAACCGG CGAGAACTAC
GCCCGCTGGT GCAACTCGAA ATTCCAGGAA CTGATTACCC GCGCCCGCGA GGTGATCGAC
AACGACGAAC GTGCAAGGCT CTATAGCGAG GCATTGAAGG TGTACGATGA CGACCACCCC
TGGATCAGCA TGGCCCATCC GAAGATGTTC ACCGCCATGC GTGACAACGT TGAGGGCTAC
GTGATCAGCC CTCTGACCAA CAACAACTTC GCCACCACCA AGGTGAAGTA G
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| Protein sequence | MQRAFMKSLP LRLALAALVL GSTTQLAAKP LVVCTEASPE GFDVVQYTTA VTFDASSETV
FNRLVDFKPG TTDIQPALAE RWDISPDGLT YTFHLRHGVK FHTTDYFKPT REFNADDVLW
SLNRQLDPNH PWHDKTSVGY PYFESMAFKE LLKSVSKSDD NTVMITLTRP EAPFLHDMAM
GFTSIYSAEY GDKLLEAGKT AELNSKPIGT GPFIFQRYNK DAQVRFKPNP EYFRGKPPAD
ALVFAIATDS NVRLQKLRAN ECQVALYPKP DDVPSIKADP KLKVAEIEAL VTGYIAMNTE
HPYLSDVRVR KAINMAFDRQ THVDQLFGKG NALVGVNPYP PTMIGYNTSN KNPPRDLDKA
RALLKEAGVP EGTVITLFTR NGGGMTNPNP RLSAEMLQAD LKQIGLKLDV RVMEWAEMLR
RAKKGEADLV STGWAGDNGD PDNFLTPLLS CDAAKTGENY ARWCNSKFQE LITRAREVID
NDERARLYSE ALKVYDDDHP WISMAHPKMF TAMRDNVEGY VISPLTNNNF ATTKVK
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