Gene PputGB1_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0924 
Symbol 
ID5868684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1059414 
End bp1060424 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content62% 
IMG OID641546025 
Productalkaline phosphatase 
Protein accessionYP_001667170 
Protein GI167031939 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGTT TTATTGCCCG GCGCCTTGGC CTGCTGATAC CGACCTTTTT CGGCATCACC 
TTGCTGACCT TCGCGCTCAT ACGCCTGATC CCCGGCGACC CGGTGGAAGT GATGATGGGC
GAGCGCAGGG TCGACCCCGA AATGCATGCC CAGGCCATGG AGCGCCTGGG CCTGAACAAG
CCACTGCCGG TCCAGTACCT GGACTACATC GGCAAGCTGG CCCAAGGTGA CCTCGGCGAA
TCGCTGCGCA CCCGCGAAAG TGTGTGGAAC GAGTTTCTCA CCCTGTTCCC GGCCACCCTG
GAGCTGGCCT TCGCCGCTTT GCTATTCGCC GGCATTGTCG GCCTGCTGGC CGGGGTGATC
GCCGCACTCA AGCGCGGTTC GCTGTTCGAC CACGGTGTAA TGGGCATTTC ACTGGCCGGC
TATTCGATGC CAATTTTCTG GTGGGGCCTT ATCCTGATCA TGTTCTTCTC GGTGAGCCTG
GGCTGGACGC CGGTGTCCGG GCGCATCGAC CTGCTCTACG ACATCGAGCC GAAGACCGGC
TTCATGCTGA TCGATACCTT GCTCAGCGAC GAGGATGGTG CGTTCAAGGA CGCGGTGATG
CACCTGATTC TGCCGGCCAT CGTGCTCGGC ACCATCCCGC TGGCGGTGAT CGCCCGCATG
ACCCGCTCGT CAATGCTCGA AGTGCTGCGC GAAGACTACA TCCGTACCGC ACGCGCCAAA
GGCCTTTCGC CAGCCCGCGT GGTGTTCGTG CACGGCCTGC GCAACGCCCT GATCCCGGTG
CTGACCGTAT TCGGCCTGCA GGTCGGCACG CTGCTGGCCG GTGCGGTACT GACCGAAACC
ATCTTTTCCT GGCCGGGCAT CGGCAAGTGG CTGATCGAAG CCATCGGTGC CCGTGACTAC
CCCGTGGTCC AGAACGGCAT CCTGTTGATC GCCTGCCTGG TGATTCTGGT CAACTTCGTC
GTAGACATCC TCTACGGCCT GGCCAACCCA CGCATCCGTC ATCAGCGCTG A
 
Protein sequence
MLSFIARRLG LLIPTFFGIT LLTFALIRLI PGDPVEVMMG ERRVDPEMHA QAMERLGLNK 
PLPVQYLDYI GKLAQGDLGE SLRTRESVWN EFLTLFPATL ELAFAALLFA GIVGLLAGVI
AALKRGSLFD HGVMGISLAG YSMPIFWWGL ILIMFFSVSL GWTPVSGRID LLYDIEPKTG
FMLIDTLLSD EDGAFKDAVM HLILPAIVLG TIPLAVIARM TRSSMLEVLR EDYIRTARAK
GLSPARVVFV HGLRNALIPV LTVFGLQVGT LLAGAVLTET IFSWPGIGKW LIEAIGARDY
PVVQNGILLI ACLVILVNFV VDILYGLANP RIRHQR