Gene PputGB1_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0922 
Symbol 
ID5868682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1057498 
End bp1058466 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID641546023 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001667168 
Protein GI167031937 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGT TGCAGATCAA CAACCTCAAC GTGCGCTTCG GCGACGCCAA TGCGGTACCG 
GTCGTCGACG GCCTGGACCT GGCGGTGGAG GCCGGCGAAA TCCTGGCCAT CGTCGGCGAG
TCCGGCTCGG GCAAATCGGT CACCATGATG GCCTTGATGG GCCTGATCGA AGCCCCTGGG
CGTATTACCG CCGACGCCCT CACCTTCGAT GGCACGGACA TGCTCAAGCT CAGCGGCCGG
CAACGACGCA AAGTGGTTGG CAAGGATATC GCCATGGTCT TCCAGGACCC GATGACCGCG
CTCAACCCCA GCTATACCGT GGGTTTCCAG ATCGAAGAAG TGCTGCGCCA GCACCTGGGC
CTGAAGGGCA AGGCCGCGCG CCAGCGTGCC CTCGAACTGT TGAAAAAAGT CGAGATCCCG
GCTGCAGAAA GTCGCCTGGA TGCTTACCCG CACCAACTGT CCGGCGGCAT GAGCCAGCGT
GTGGCGATAG CCATGGCGAT TGCCGGCGAG CCCAAGCTGT TGATCGCCGA CGAACCGACC
ACCGCGCTGG ACGTGACCAT CCAGGCGCAG ATCATGGAGC TGCTGGTCAA CCTGCAGAAA
GAGCGCAACA TGGCGCTCAT CCTGATCACC CACGACCTTG CCGTGGTCGC CGAAACCGCC
AGGCGGGTGT GCGTGATGTA CGCCGGCCAA GCCGTGGAAG TGGGCCAGGT GCCGGAGCTG
TTCGACGTGC CCGCCCACCC GTACAGCGAA GCCTTGCTGG CAGCAATCCC CGAGCACAGC
ATCGGCGCCG AACGCCTGGC CACCCTGCCT GGCATTGTCC CTGGGCGCTA CGACCGCCCT
GTCGGCTGCC TGCTGTCGCC GCGTTGCCCG TACGTGCAGG ACACATGCCG GCGCCAGCGC
CCGCCTCTCG ACCCACAGGC CCATAGCCTG GTGCGTTGCT TCTACCCGCT GAACCAGGAG
GTGGCGTAA
 
Protein sequence
MSLLQINNLN VRFGDANAVP VVDGLDLAVE AGEILAIVGE SGSGKSVTMM ALMGLIEAPG 
RITADALTFD GTDMLKLSGR QRRKVVGKDI AMVFQDPMTA LNPSYTVGFQ IEEVLRQHLG
LKGKAARQRA LELLKKVEIP AAESRLDAYP HQLSGGMSQR VAIAMAIAGE PKLLIADEPT
TALDVTIQAQ IMELLVNLQK ERNMALILIT HDLAVVAETA RRVCVMYAGQ AVEVGQVPEL
FDVPAHPYSE ALLAAIPEHS IGAERLATLP GIVPGRYDRP VGCLLSPRCP YVQDTCRRQR
PPLDPQAHSL VRCFYPLNQE VA