| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0921 |
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| Symbol | dppF |
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| ID | 5868681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1056530 |
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| End bp | 1057498 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546022 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001667167 |
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| Protein GI | 167031936 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.918451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.93527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCG TTCTATCCGC CCGGGAGCTT ACCCGGCATT ACGAAGTCTC CCGCGGGCTG
TTCAAGGGCC ACGCGCTGGT CCGTGCGCTG AATGGCGTGT CGTTCGAACT GGAGGCGGGC
AAGACTCTGG CCGTGGTCGG CGAGTCCGGC TGTGGCAAGT CGACCCTGGC ACGCGCCCTG
ACCTTGATCG AAGAGCCATC GTCCGGCTCA CTGCAAATTG ATGGCACCGA AGTGAAAGGC
GCCAGCAAGG CTGAGCGCAA GCAACTGCGC CGCGATGTGC AGATGGTGTT CCAGAGCCCC
TACGCCTCGC TCAACCCACG GCAAAAGATT GGTGACCAGC TGGCCGAGCC ACTGTTGATC
AACACCTCGC TGAGCAAAGC CGAGCGCCGC GACAAGGTGC AGAAGATGAT GGAACAGGTT
GGCCTGCGCC CCGAGCACTA CCAGCGTTAC CCGCACATGT TCTCTGGCGG CCAGCGCCAG
CGTATCGCCC TGGCGCGGGC GATGATGCTG CAACCCAAGG TGCTGGTAGC GGACGAACCG
ACCTCGGCGC TGGACGTGTC GATCCAGGCG CAGGTGCTGA ACCTGTTCAT GGACTTGCAA
AAAGAGTTCA ACACCGCCTA CGTGTTCATC TCGCATAACC TGGCGGTGGT ACGGCATGTG
GCAGACCAGG TACTGGTGAT GTACCTGGGG CGGCCGGCGG AAATGGGGCC TAAAGAGGAT
ATCTACGAGA AGCCGCTGCA TCCCTATACC CAGGCGCTGC TGTCGGCGAC ACCGGCCATT
CATCCCGACC CGCTGAAGCC GAAGATCCGC ATTGTCGGGG AGCTGCCCAA CCCGCTGAAC
CCGCCGGATG GGTGTGCATT TCACAAACGT TGCCCGTATG CGACGGAACG GTGTGCCAAA
GAGGTGCCGG CGTTGCGGCA GGTGAGTACG CGGCAGGTGG CTTGTCACTA TGCCGAGCAG
TTCCTTTAG
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| Protein sequence | MAVVLSAREL TRHYEVSRGL FKGHALVRAL NGVSFELEAG KTLAVVGESG CGKSTLARAL
TLIEEPSSGS LQIDGTEVKG ASKAERKQLR RDVQMVFQSP YASLNPRQKI GDQLAEPLLI
NTSLSKAERR DKVQKMMEQV GLRPEHYQRY PHMFSGGQRQ RIALARAMML QPKVLVADEP
TSALDVSIQA QVLNLFMDLQ KEFNTAYVFI SHNLAVVRHV ADQVLVMYLG RPAEMGPKED
IYEKPLHPYT QALLSATPAI HPDPLKPKIR IVGELPNPLN PPDGCAFHKR CPYATERCAK
EVPALRQVST RQVACHYAEQ FL
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