| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0920 |
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| Symbol | |
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| ID | 5868680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1055434 |
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| End bp | 1056258 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546021 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001667166 |
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| Protein GI | 167031935 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.100818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.609356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTATC TCCCAATGAC CGCCACCGCC CTTCCTGACG GCCCCGAGCA AACCCCGCTC
ACCGCCGACA CCGTGCTGCG CTACCACCTG TGCTGGAAGC ACCGCGACCT CGACGGCGTC
ATTGCGCTGT ACCACCCCGA CATCCAGTAC CACGACTTCT TCCAGAACCG CGTGCTCGGC
TACCAGGCGC TGCGCGACTA CGTACGCGCC TGCCTGCCCC ACGAAGCCGG CGAAGACATC
GTCCACAGCG ACCGCATCCG CGTCGATGGC TGCACCGCGT TCATCCAGTA CCAGGTCACA
GTCCAGGGCG GCGACGGCCT GGTGGCGTTC CAGTCCAGCG AAGCCATCAC CGTCAAAGAC
GGGCTGATCT GGCGGGTCAA CGAATACGCC ACGCTTGTTC GCCAGAACGG CAGCGGCCAC
GCCGGCAGCG GCCCACGCCC GGCCACCAGC CGCCTGGGCC TGTCACCCCG GCAGTTGTCG
ACCATGGCCC AGGACCTGGA GCACTACTTC CAGCGCCAGC GCCCCTACCT GGACCCGGAG
CTGGACCTGC AGCAAGTGGC CGACGCCAGT GGCTATAGCC GCAACCAAAT CTCCTACCTG
CTGAACCAAG TGCTGGGGCA AAGCTTCTAC CGCTACGTCA ACCAGGCCCG CCTGCAGCAC
CTGATGGCCA GCCTCGACGA CGACCGCGTC GAGGCGACGA TCGACGAGCT GGCGTTCAGC
GCCGGCTTCA ACTCGCTGTC AGCGTTCTAC AAGTGCTTCC GTGAACACAC CGGGCTCACG
CCCAAGGCCT ACCTGAAGCA AATTTCCCTG CGTGCACGCA CGTAA
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| Protein sequence | MHYLPMTATA LPDGPEQTPL TADTVLRYHL CWKHRDLDGV IALYHPDIQY HDFFQNRVLG
YQALRDYVRA CLPHEAGEDI VHSDRIRVDG CTAFIQYQVT VQGGDGLVAF QSSEAITVKD
GLIWRVNEYA TLVRQNGSGH AGSGPRPATS RLGLSPRQLS TMAQDLEHYF QRQRPYLDPE
LDLQQVADAS GYSRNQISYL LNQVLGQSFY RYVNQARLQH LMASLDDDRV EATIDELAFS
AGFNSLSAFY KCFREHTGLT PKAYLKQISL RART
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