Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0919 |
Symbol | |
ID | 5868679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1053963 |
End bp | 1055390 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641546020 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001667165 |
Protein GI | 167031934 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.108527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.544612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTGG AGCCGAACCC GATGCAACCC CTGCGCACAC TAAGCCTGTG GATGGACCAG CTTGACGAGC CATTGTGCGC CCGCCCGGCC CTGCGCGAAG AGCTGACAGC GGATGTGTGC ATCATTGGCG CCGGCTATAC CGGTTTGTGG ACCGCCTACT ACCTCAAGCG CCAGGCGCCA CAGCTGAACA TCGCCGTGAT AGACGCCAAC ATCGCCGGTT TTGGCGCCTC GGGGCGCAAC GGTGGTTGGC TGATGGGTAA CCTGCTGGGC GAAGACCGCC TGCTCGCCAC CCTGTCGCCG CAACAGCGCC GTGCCAGCAT CGACCTGCTG CACGGTATTC CCGATGAAGT GCACAGCGTG CTGCTACGCG AAGGCATCGA TTGCGACTAC CGCAAAGGTG GCGTGCTGTA CTGCGCTGCG CGCTACCCGG AACAGGAGCG CAGCCTGCGC GCATACCTCG ACGACTTGTA TCGCCAGGGC ATGACCGAGG ACGACTACCG CTGGCTACGC CCCGAGCAAC TGGACGCGCA GCTGCGGGTC AGTAATGCGT TTGGCGCCAT CTACAGCCCG CACACCGCGA CTATCCAGCC GGCCAAACTG GTGCGCGGCC TGGCTCGGGC AGTGGAGGCG CTGGGTGTAC CGATCTACGA AAACACCCCG GCCATCGACT GGCAGCCGGG TGAGGTGCGT ACGCCACTGG CACGGATTCG CTGCCAGTGG ATGGTGCCCG CCGTGGAAGG CTACGCTGCC AGCCTGCCGC CGTTGGGCAA ACATCAGCTG CCGGTACAGA GCCTGCTGGT GGCCACCGAG CCGCTGCCGG AGGCCACCTG GGCACAGATC GGCCTGAGCC AGGGGCAAGC GTTCAGCGAA AGCAGCCGCC AGGTCACCTA CGGCCAGCGC ACCGCCGACA ACCGCCTGGT GTTCGGCGCC CGCGGAGGTT ACCGCTTCGG TGGACGCCTG CGGGAAAACT TCAACCTCCA CGAGCACGAA GTCGAGCTGC GTCGCTACTT GTTCGGCGAG CTGTTCCCAC AGCTCAGGCA CGTGCGCATC ACTCACTCCT GGGGCGGCAA TCTGGGCATG GCGCGGCGCT TCCGCCCGCA CATGCTTTGC GACCGCCAAC GCGGTATCGC CCTGGCTGGC GGTTACGGCG GCGAAGGCGT GGGCGCCACC AACCTGGGCG GGCGCACCCT GGCCGCGCTG ATCCTCAACC AGCACAACGA ACTGACCGCA CAGCCCTGGG TACTCGACAA CCGCCCGCTT TCCAGCCTGG CCAGCTGGCC GCCCGAGCCC TGCCGTTGGT TGGGCTACAA CGCAATCATC CAAAGTTTCG TCCACGAGGA CCGGACCCTC GCCAACCCCG CCAGCGCGCC GTGGAGGCGG CGCCTGGCCA GCTCGCTTGC GGACTTCATG GAAGGCTTCA TGCACTGA
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Protein sequence | MDVEPNPMQP LRTLSLWMDQ LDEPLCARPA LREELTADVC IIGAGYTGLW TAYYLKRQAP QLNIAVIDAN IAGFGASGRN GGWLMGNLLG EDRLLATLSP QQRRASIDLL HGIPDEVHSV LLREGIDCDY RKGGVLYCAA RYPEQERSLR AYLDDLYRQG MTEDDYRWLR PEQLDAQLRV SNAFGAIYSP HTATIQPAKL VRGLARAVEA LGVPIYENTP AIDWQPGEVR TPLARIRCQW MVPAVEGYAA SLPPLGKHQL PVQSLLVATE PLPEATWAQI GLSQGQAFSE SSRQVTYGQR TADNRLVFGA RGGYRFGGRL RENFNLHEHE VELRRYLFGE LFPQLRHVRI THSWGGNLGM ARRFRPHMLC DRQRGIALAG GYGGEGVGAT NLGGRTLAAL ILNQHNELTA QPWVLDNRPL SSLASWPPEP CRWLGYNAII QSFVHEDRTL ANPASAPWRR RLASSLADFM EGFMH
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