| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0917 |
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| Symbol | |
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| ID | 5868677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1052456 |
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| End bp | 1053535 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641546018 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001667163 |
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| Protein GI | 167031932 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0241526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.315569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACGC TCCTTCTCGC ACCCCTGATG CTGGCCGCCA GCGTGGCCAG CGCCGCTGAA
ACGGTGAAGA TCTACAACTG GTCCAGCTAC GTCGCTCCCG ATACGCTGAA AAACTTCCAG
CTCGCCAGCG GCATCGTGCC GACGTACGAC GTGTACGACA GCAACGAAAC CCTCGACGGC
AAGCTGATGA CCGGCAACTC CGGCTACGAC GTGGTGTTCC CTTCCAACCA CTTCATGGCC
CGGCAAATCC AGGGCAAGGC GCTGAAGCGC CTGGACAAGT CGCAGTTGCC CAACTGGAAA
AACCTCAACC CGGTACTGCT CAAGGCGCTG GAAGTGAACG ACCCGGGCAA CCAATACGGC
TTCCCGTACC TGTGGGGCAG CACCGGCATC GGCTACAACA TCGACAAGGT CAAGGCTGTG
CTCGGCGACA ACGCGCCACT GGACTCGTGG GACCTGATCT TCAAGCCCGA ATACATGAGC
AAGCTGAAAA GCTGCGGCGT CGCCGTGTTG GACAACGGCC CCGAACTGCT GCCCATCGCC
CTGCACTACC TGGGCCTGCC GCACCACAGC CAGAACCCGG CCGACTACGA CAAGGCCAAG
GCACTGTTGA TGCAGGTGCG GCCATACATC AGCTACTTCC ACTCATCGAA GTACACCGGC
GACCTGGCCA ACGGCGATAT CTGCGTGGTG GTGGGTTTCT CAGGGGATGT GCTGCAGGCG
AAAAACCGGG CTGAAGAGGC GAAGAACGGG GTGAAGGTGG GTTACTCGAT ACCCAAGGAA
GGCGCGCCGA TGTGGTTCGA CATGGTGGCC ATGCCGGCCG ATGCACCGGA TGAGAAGGCC
GGGTATGCCT ACATGAACTA CCTGCTGCAG CCGGAAGTGA TGGCCAACAT CAGCAACCAT
GTGCAATACG CCAACGGCAA CCTCAAGGCG GACGGGTTGG TGGACCCGGC GATGAAGGGT
AATACGATGA TTTACCCGAG CGACGAGGTG ATGGGCAAGC TGTATGCGCT GGAGGCGATG
CCGGCGAAGA TCGACCGCAT CAGGACGCGG ATCTGGACCA GCATCAAAGC CGGAAATTGA
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| Protein sequence | MRTLLLAPLM LAASVASAAE TVKIYNWSSY VAPDTLKNFQ LASGIVPTYD VYDSNETLDG
KLMTGNSGYD VVFPSNHFMA RQIQGKALKR LDKSQLPNWK NLNPVLLKAL EVNDPGNQYG
FPYLWGSTGI GYNIDKVKAV LGDNAPLDSW DLIFKPEYMS KLKSCGVAVL DNGPELLPIA
LHYLGLPHHS QNPADYDKAK ALLMQVRPYI SYFHSSKYTG DLANGDICVV VGFSGDVLQA
KNRAEEAKNG VKVGYSIPKE GAPMWFDMVA MPADAPDEKA GYAYMNYLLQ PEVMANISNH
VQYANGNLKA DGLVDPAMKG NTMIYPSDEV MGKLYALEAM PAKIDRIRTR IWTSIKAGN
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