| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0911 |
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| Symbol | |
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| ID | 5868671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1044298 |
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| End bp | 1046727 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546012 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001667157 |
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| Protein GI | 167031926 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.11228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACA ACAAACCCTT CCCACGCTTG CGCGCCTTGG CGCTGGCCCT GGTGGTCAGT
GCCGTGGCCG TCAACAGCCA GGCCGCAGAG GCCGGCAACA CCATCCAGAT CCAGGCCCAG
CCGTTGGGCT CGGCGCTGAC CCAGCTCGGT CAGCAGACCA GCCTGCAGCT GTTCTTCAGC
CCCGAGCTGG TCGCCGGCAA GCAGGCCCCT GCGGTGTCCG GCAACCTGGC GCCGGTGCAG
GCGCTGCAAC AGTTGCTGCA AGGCAGCGGG CTGACCTTCG AGATGTCCCA GGACACCGTT
GTAATAAAGC CTCTGCCGAC CACCCTTGAG CTGGGCAGCG GCAGCCTGGA GCTGGCACCC
ACCGACATTA AAGTGGTCGG TGACTGGCTG GGTGATGCCC AGCAAAGCGT GGTGCAGAAC
CACCCTGGCG CACGCACCGT GGTGCGCCGC GAGGCGATGG TGGAGAAGGG CGCAATGAAC
GTGCGCGACG TGCTGCGCGG TATCCCCGGC GTGCAAGTGC AGGACTCCAA CGGCACCGGC
GGCAGCGACC TGTCGCTGAA CGTGGGTGTG CGTGGCCTTA CTTCGCGCCT GTCGCCGCGC
TCCACGGTAC TGATCGATGG CATCCCGGCT GCTTTCGCAC CGTATGGTCA GCCACAGCTG
TCGATGGCGC CGATTTCCTC GGGCAACCTC GACAGCATCG ATGTGGTGCG GGGGGCCGGC
TCGGTGCGCT ATGGCCCGCA AAACGTCGGT GGGGTGATCA ACTTCGTGAC CCGGGCAATC
CCCGAGAAAG CCTCGGCGGA GTTGTCTACC ACCCTGGAAA CCTCCCAGCA CGGCGGCTGG
AAACACACCG AGTCGGCCTT CGTCGGCGGC ACGGCGGACA ACGGCATGGG CGTGGCGCTG
CTGTACACCG GGGTTAACGG CAACGGTTAC CGTGAAAGCA ACAACGGCAA CGACATCGAC
GACGTCATCC TCAAGACTCA CTGGGCGCCC ACCGACGTCG ACGAGTTCTG GCTCAACTTC
CATTATTACG ATGGCCGTGC CGACATGCCC GGCGGTTTGA CCCAGGCCCA GTACGACAGC
AACCCGTACC AGTCCCTGCG CGACTACGAC TACTTTGCCG GCCGGCGCAA GGATGTATCG
TTCAAGTGGC AGCGCCAGCT CGACGATGCC ACCCAGTTCG AAGTGCTGAC CTACTACACC
GACAGCTTCC GCGGCAGCGC CATCGCCTCG CGGGACATGA AGACCCTGTC GTCGTACCCG
CGCAACTACC ACACCTTCGC CATCGAACCC CGCGTCTCGC GAATCTTCTT CGCGGGCCCG
ACTACTCAGG AAGTCAGCGT GGGCTATCGC TACTTGAAGG AAGCGATGCG CGAGCAATCG
ACGCGCCTGG CGCTGATCGA CAACGTGCCC ACGTATACCC CGACTTCCGA TGGCCACGTG
TTCCAGGACC GCAGCGGCGG CACCGAGGCC AGTGCCTACT ACATCGACGA CAAGATCGAC
GTGGGTAACT GGACCATCAC CCCTGGCGTC CGATTCGAGC ACATCAACAC CGATTGGCGC
GACCGCCCGG TGCTGGATGC CAACAACCGC CCGGTGCCGG AGAAGAAGCG CAGCATCACC
AGCAACGAGC CGCTGCCGGC GCTGAGCGTG ATGTACCACA TCTCCGATGC GTGGAAAGTG
TTCGCCAACT ACGAGACTTC GTTCGGCAGC CTGCAGTACT TCCAGTTGGG CCAGGGCGGT
AGCGGCAACA ACACGGCCAA TGGCCTGGAG CCGGAGAAGG CCAAGACCTA CGAAATCGGC
ACGCGCTATG ACGATGGCGG CTTTGCCGGT GAGCTGACCG CGTTCTACAT CGACTTCGAT
GACGAGCTGC AGTACATCAG CAACGATGTG GGTTGGACCA ACCTCGGCGC CACCAAGCAC
CAGGGTATCG AGGCCTCGGT ACGTTATGAC CTGGCCGGGC TGGACCCGCG CCTGGACGGG
CTGTCGGTGA GTGGTGGCTA CACCTACACC CGTGCAACCT ATGAAGGGGA TATTCCGGGC
TTCAAGGGGC GTGACCTGCC GTTCTATTCA CGCCAGGTGG CGACTGCCGG GGTGCGTTAC
GCGGTCAACC GCTGGACCTG GAACCTGGAC GCCTACGCCC AATCCAAGCA GCGTGCGCCG
GGCACCGGGA TCAATGCCGA TGGCAGCTTC AATGGCGACT ACATTACCGA GCCGAGTGCC
GATGGGCAGT ATGGCGATAT TCCGGGCTAT GTGACCTGGC ATGCCCGTGG CGGGTATGAG
TTCGGGCCAG AAATGTCCAA CCTGAAGCTG GCGGCGGGGG TGAAGAACTT GTTCGACAAA
CAGTACTTCA CCCGCTCCAG CGACAACAAT GCCGGCATCT ATGTGGGTGA GCCGCGGACC
TTCTATGTGC AGGCCAGTGT AGGGTTCTGA
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| Protein sequence | MNNNKPFPRL RALALALVVS AVAVNSQAAE AGNTIQIQAQ PLGSALTQLG QQTSLQLFFS
PELVAGKQAP AVSGNLAPVQ ALQQLLQGSG LTFEMSQDTV VIKPLPTTLE LGSGSLELAP
TDIKVVGDWL GDAQQSVVQN HPGARTVVRR EAMVEKGAMN VRDVLRGIPG VQVQDSNGTG
GSDLSLNVGV RGLTSRLSPR STVLIDGIPA AFAPYGQPQL SMAPISSGNL DSIDVVRGAG
SVRYGPQNVG GVINFVTRAI PEKASAELST TLETSQHGGW KHTESAFVGG TADNGMGVAL
LYTGVNGNGY RESNNGNDID DVILKTHWAP TDVDEFWLNF HYYDGRADMP GGLTQAQYDS
NPYQSLRDYD YFAGRRKDVS FKWQRQLDDA TQFEVLTYYT DSFRGSAIAS RDMKTLSSYP
RNYHTFAIEP RVSRIFFAGP TTQEVSVGYR YLKEAMREQS TRLALIDNVP TYTPTSDGHV
FQDRSGGTEA SAYYIDDKID VGNWTITPGV RFEHINTDWR DRPVLDANNR PVPEKKRSIT
SNEPLPALSV MYHISDAWKV FANYETSFGS LQYFQLGQGG SGNNTANGLE PEKAKTYEIG
TRYDDGGFAG ELTAFYIDFD DELQYISNDV GWTNLGATKH QGIEASVRYD LAGLDPRLDG
LSVSGGYTYT RATYEGDIPG FKGRDLPFYS RQVATAGVRY AVNRWTWNLD AYAQSKQRAP
GTGINADGSF NGDYITEPSA DGQYGDIPGY VTWHARGGYE FGPEMSNLKL AAGVKNLFDK
QYFTRSSDNN AGIYVGEPRT FYVQASVGF
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