| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0910 |
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| Symbol | |
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| ID | 5868670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1043227 |
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| End bp | 1044189 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641546011 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_001667156 |
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| Protein GI | 167031925 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0697892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC ACGGTACCGA TACCGTCCGC GAGCAGGCGG CCGCATGGTT TGCCCGCGTG
CAGGATGCGC CTCGGGATGC CGGGCTGCAG AAACAGTTGC GTGCCTGGCT GGCGAGCGAC
GAGCGCCACC GGGAAGAATA CGAACACCTC GACCGCGTGT GGCAGGCCGC CGCTTTCATT
CCACGCCAGC GCCTGGAGGC GCTGTGCCAA CCAGACCCGG TGCAGCAGTT GCCACGTCGG
CGTTTCGTGC GCCAGGCGTT GGCCGCCAGT GTCGCGGTAT TGGCACTGGG CCTGGGTTGG
GGCGGTTGGC ACTATCAGCA GCTGAACCAT CAGGGCAGCT TGCAGACGGC TTTCAATGAG
CGTCGTCAGG TCGAACTGCC GGATGGCTCG CAGCTGGAGC TCAATGGCAG TACACAGGTG
CAGGTCGACT TCAGTGCCGG CCAGCGGCAT ATTCGCCTGA ATGCCGGTGA GGTCATGTTC
AGCGTCGCCC ACGACAGTGA CAGGCCGTTC GTCATCGACA CCGCTCAAGG CCGCGTGACG
GTAACCGGTA CCCGCTTTGA CGTGCGCCTG GACCCGGCCA GCACCCGTGT GGCGGTGGAG
CAGGGTTCAG TGCGTGTGCA GGGCAAGGGT GCCTCGTTGG CGCAGCTCAC GGCAGGGCAG
GGCTCGCATA TCGATGCACA AGGCCTGGTC ACCGCACCCT ACGCAGTCAA TGCCGCCACT
GTGACGGCCT GGCGCCAGGG CAAGCTGGTG TTCGACAACG CCACCCTCGC CGAAGTCGTG
GCCGAAGCCT CGCGCTACCG TAGCCAGCCA TTACGGGTCG CCCCTGGTAA AGTCGCCCAA
CTGCGCCTGT CCAGCACCTT CAATGTCGAT GACACCGACG CCCTGTTGCG GGCCTTGCCG
AGCATCCTCC CCGTGGCCAT CAAGGCCCAT GAAGACGGCT CCAGCGAAAT AATCGCGAAA
TAG
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| Protein sequence | MKQHGTDTVR EQAAAWFARV QDAPRDAGLQ KQLRAWLASD ERHREEYEHL DRVWQAAAFI
PRQRLEALCQ PDPVQQLPRR RFVRQALAAS VAVLALGLGW GGWHYQQLNH QGSLQTAFNE
RRQVELPDGS QLELNGSTQV QVDFSAGQRH IRLNAGEVMF SVAHDSDRPF VIDTAQGRVT
VTGTRFDVRL DPASTRVAVE QGSVRVQGKG ASLAQLTAGQ GSHIDAQGLV TAPYAVNAAT
VTAWRQGKLV FDNATLAEVV AEASRYRSQP LRVAPGKVAQ LRLSSTFNVD DTDALLRALP
SILPVAIKAH EDGSSEIIAK
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