| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0904 |
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| Symbol | |
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| ID | 5868664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1036406 |
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| End bp | 1038712 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546005 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001667150 |
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| Protein GI | 167031919 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0551593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGT ACGTACCATC TGCAGTGAGT TCGCCACGCC TGATCGTGTC TGCCATCGGT
GTCGCCCTTA GCGCCTCGTC GGTGTATGCC GCCGACCCGG CCGCCAGCAG CGCCATTACC
CTCGATGCCA CCAGCGTCAA CGGCAAGGCT GAACAAGCCA GCACCGATTA CAAGGTCGAG
AAGGCCGCCT CGCAGAAGTA CACCGCGCCG CTGGTGGACA CCCCGCGCTC GGTCACCGTG
ATCCCGCAGC AAGTGATCAA GGACACCAAT GCCCTGACCC TGCAGGACGC CTTGCGTACT
GTGCCGGGCA TCACCTTTGG TGCCGGCGAA GGCGGCAACC CGCAAGGTGA CCGCCCGTTC
ATTCGCGGCT TCGACGCCCA AGGCGATACC TACCTGGATG GCGTGCGTGA CACTGGCGCG
CAAACCCGCG AAATCTTTGC CATCGAATCG GTTGAAGTGG CCAAGGGCCC GAACTCGGCC
ATCGGTGGCC GCGGCGCGGC CGGCGGCACC ATCAACCTGG TGAGCAAGCG TGCGCACCTG
GGCAACTCGC TGGACGGCGC CTGGACCTGG GGCAGCGACC AGACCCAACG CTACACCTTC
GACGGCAACT ACCAATTCAG CGACACCGTT GCCGGCCGCC TGAACCTGAT GACCCACGAA
AGCAACGTCG CCGGCCGCGA CAAGGTCAAC TACGACCGCT GGGGTATCGC CCCATCGCTG
GCCTTCGGCC TGGGCACCCC GACCCGCGTC AACCTCGACT ACTATCACCT GGAAAGCGAC
GACCTGCCGG ATTCGGGCAT CCCGTACAGC ATTCCGACCA ATGGCAGCGG TGGACGCACC
TCGGCGCACC CGAGCAAACC GGACGACGGC GGCGACAGCG ATAACTTCTA TGGCTTGACC
GGTCGCGACT TCCGCAAGAG CCGCGTGGAC ATCGCCACCT TCGCCATCGA GCACGACCTG
ACCGACTCGC TGACCATCAA GAACACCCTG CGTCACGGCA ACAGCATGCA GGACTACATC
CTGACCCAGC CTGACGACAG CAAGGGCAAC GTCAACAACG GTAGCGTCTG GCGCCGTGCC
AACACCCGTG TCGGCAACAC CGCCACCACC ACCAACCAGA CCGACCTGTT CGGCGAGTTC
TACCTGGGCG GCCTGAAGAA CAGCTTCTCC ACCGGTATCG AACTGAGCCG TGAAGAGAGC
AAGCGCTCCA CCTACAACGT CGACACCAAT ACCCGTGGCT CGACCGCCAC CACCTGTAAC
CCAAGCCTGA TCGGCGCGAA CAGCGGCTAC AACTGCACCT CGCTGGGCAA CCCGAACCCG
GACGACCCAT GGAACGGCGC GATCTCGCGC AACTACGCCG GCACCGATAC CAAAGGCACT
ACGCGCGCCC TGTATGTGTT CGACACCCTG GAGCTAACGC CTGATTGGCT GCTGAACATG
GGGCTGCGCT ACGACCACTT CGACACCCAG TACCGTACTT ATGACGCTGC TGGCGCGACC
GTCGTGAACA CCAAAGGAAT CGCAGCCAAA GGTCGAGACA AGAGTGAATT CGTAACGGGC
CAACTTGGCC TGGTCTGGAA GCCAGCCGAG AACGGTAGCA TCTACGTTTC CTATGCCACC
TCCGCGACAC CTCCAGGCGC GATGCTTGGC GAAGGCATGG AAGGCAACCC GCCACCAAAC
AGCACTGACC GCAACGGCAA CCTGTTGAGC AGCGACATGG AGCCGGAAGA AACCACCAAC
TACGAAATCG GCACCAAGTG GGACCTGCTC GACCAGCGCC TGTCGCTGAC CGCCGCACTG
TTCCGCACCG AGAAGGAAAA CGCCCGCGTC CAGGTGGACA CCACCACCTA CGAAAACGTC
GGCGAAACCC GCGTGCAAGG TATCGAACTG TCGGCCAGCG GCAAGATCAC CGACAAATGG
CAGGTATTCG CCGGTTACAC CTACATGCAG GCTCGCCAGA TCGACGGCGG CCCGCTGGGC
AAGGCCAACG ACGGCAACCA GCTGCCGAAC ACGCCGAACA ACAGCGCCAG CCTGTGGACG
ACCTACTCGA TCACGCCGAA GCTGACCGTC GGTGGCGGTG CCTTCTACGT GGATGACGTG
TACGGCAGCG TGGCCAACAC CACCATGGTC GACAGCTACG TACGCTACGA CGCCATGGCC
GCCTACAAGC TGACCAAGAA CGTCGACCTG CAGTTGAACG TGCAGAACCT GACCAACGAG
GTGTACTACG ACAAGGCCTT CTCCACCCAC TTCGCCAACC AGGCGGCCGG GCGGACTGCA
CTGTTGACCA CCAGCGTCCA CTTCTGA
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| Protein sequence | MRQYVPSAVS SPRLIVSAIG VALSASSVYA ADPAASSAIT LDATSVNGKA EQASTDYKVE
KAASQKYTAP LVDTPRSVTV IPQQVIKDTN ALTLQDALRT VPGITFGAGE GGNPQGDRPF
IRGFDAQGDT YLDGVRDTGA QTREIFAIES VEVAKGPNSA IGGRGAAGGT INLVSKRAHL
GNSLDGAWTW GSDQTQRYTF DGNYQFSDTV AGRLNLMTHE SNVAGRDKVN YDRWGIAPSL
AFGLGTPTRV NLDYYHLESD DLPDSGIPYS IPTNGSGGRT SAHPSKPDDG GDSDNFYGLT
GRDFRKSRVD IATFAIEHDL TDSLTIKNTL RHGNSMQDYI LTQPDDSKGN VNNGSVWRRA
NTRVGNTATT TNQTDLFGEF YLGGLKNSFS TGIELSREES KRSTYNVDTN TRGSTATTCN
PSLIGANSGY NCTSLGNPNP DDPWNGAISR NYAGTDTKGT TRALYVFDTL ELTPDWLLNM
GLRYDHFDTQ YRTYDAAGAT VVNTKGIAAK GRDKSEFVTG QLGLVWKPAE NGSIYVSYAT
SATPPGAMLG EGMEGNPPPN STDRNGNLLS SDMEPEETTN YEIGTKWDLL DQRLSLTAAL
FRTEKENARV QVDTTTYENV GETRVQGIEL SASGKITDKW QVFAGYTYMQ ARQIDGGPLG
KANDGNQLPN TPNNSASLWT TYSITPKLTV GGGAFYVDDV YGSVANTTMV DSYVRYDAMA
AYKLTKNVDL QLNVQNLTNE VYYDKAFSTH FANQAAGRTA LLTTSVHF
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