Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0899 |
Symbol | |
ID | 5868659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1028901 |
End bp | 1030043 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641546000 |
Product | outer membrane assembly lipoprotein YfgL |
Protein accession | YP_001667145 |
Protein GI | 167031914 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0000144468 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCGGTT GGAAACATGC AGCAGTGCTG ACCCTGGCCG TACTGGCCGC AGGTTGCAGC AGCAACAGCA AGAAGGAACT GCCCCCGGCC GAGCTGACCA AGTTCACCGA GGAAGTGGTG CTGAAAAAGC AGTGGAGCCG TTCGATCGGT GACGGCCAGG GTAAAACCTA CAACACCTTG GTACCGGCCA TCGAAAACGA CCGTATCTAC GCTTCCGACG TCAATGGCGA AGTCTTTGCC CTTGATCGCA TCACCGGTGA CGTGGTGTGG AAGAAAGACC TGGAGCTGCA GGTTTCCGGC GCTGTTGGCG TGGGCTACGG CCTGGTCATG CTCGGTACCC TCAAGGGTGA AGTCATTGCC CTGGACTCCA GCACCGGTGA AGAGCGCTGG CGCTCCCGCG TGACCAGCGA AGTGCTGGCA CCACCGGCCA ACAACGGTGA TGTGGTGGTG GTACAGACCC AGGACGACCG CCTGATCGGC CTGGATGCCG CCACTGGCGA CCGCCGCTGG ATCTACGAAA ACACCCCGGC CGTACTGACC CTGCGTGGCA CCGGTGCGCC GATCGCCACC AACCGTCTGG CCATTGCCGG CCTGTCCACT GGCAAGGTGG TCGCGGTGGA CATCAACAAC GGCGTGCCGG TGTGGGAAAG CCGCGTGGCC ATCCCGCAGG GCCGTTCCGA GCTGGACCGT GTGGTCGACA TCGACGGCGG TCTGCTGCTG TCCGGTGAAA CCCTCTACGT CAGCACCTAC CAGGGCCGCG TAGCGGGCCT GGACCTGGAA AGCGGCCGCG TGCTGTGGCA GCGCGATGCC TCCAGCTATG TGGGTGTCGC CCAGGGTTAC GGCAACGTCT ATGTCAGCGA AGCCTCGGGT ACTGTCGAGA GTGTCGACGA GCGCTCTTCC AGCGCCCTGT GGAGCAACGA CACCATGGCC CGCCGTCAGC TGTCGGCACC GGAAGTGTTC TCCAGCTACG TGGCTGTAGG GGACTTCGAA GGCTACCTGC ACCTGCTGAG CCAGGTCGAT GGCCGCTTCG TCGGCCGTGA GCGTATCGAC AGCGATGGCC TGCGCGCCCG GCCACTTGTG GTCGGTGACA CCATCTACGT CTTCGGCAAC AGCGGCAAGC TCGAGGCACT GACCGTCCGC TGA
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Protein sequence | MIGWKHAAVL TLAVLAAGCS SNSKKELPPA ELTKFTEEVV LKKQWSRSIG DGQGKTYNTL VPAIENDRIY ASDVNGEVFA LDRITGDVVW KKDLELQVSG AVGVGYGLVM LGTLKGEVIA LDSSTGEERW RSRVTSEVLA PPANNGDVVV VQTQDDRLIG LDAATGDRRW IYENTPAVLT LRGTGAPIAT NRLAIAGLST GKVVAVDINN GVPVWESRVA IPQGRSELDR VVDIDGGLLL SGETLYVSTY QGRVAGLDLE SGRVLWQRDA SSYVGVAQGY GNVYVSEASG TVESVDERSS SALWSNDTMA RRQLSAPEVF SSYVAVGDFE GYLHLLSQVD GRFVGRERID SDGLRARPLV VGDTIYVFGN SGKLEALTVR
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