Gene PputGB1_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0898 
Symbol 
ID5868658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1028259 
End bp1028900 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID641545999 
Producthypothetical protein 
Protein accessionYP_001667144 
Protein GI167031913 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.930556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00000414617 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGAGTA CCGATGATGA TGACCTGGCA GGGGTCAAGG ACTGGTGGAA CCGCAACGGC 
AAGCCGCTGC TGACCGGCGC ATTGCTGGCT GGCGTGGTGG TGCTGGGCTG GAATACCTGG
CACAAGTACC AGAACAACCA GTCGCAAGGT GCCTCGCAGC TGTATCAGGC TTTGCTTGAA
ACCAGCCTGA CGCCGACTGG CCAGCCAGAC GCCACCAAGG TCGCGGAGCT GTCCGGCAAG
CTCAAGAGCG AGTTCGGCGG CACCGCCTAC GCCCAGTACG GCAGCCTGTT CGTGGCCAAG
GTAGCGGTCG AGACCGGCAA GCTCGACGAC GCTGCCGCCG AGCTGAAAAG CGTGCTGGAC
AAGCCGGCCG ACGTGACCCT GGGCGAGATT TCGCGCCAGC GTCTGGCTCG CGTACTGGCC
GCCCAGAACA AGGCCGAGGA CGCCCTGAAG CTGCTTGACG GCGACGCCGA CAAAGCCTTC
CTGGCCAGCC GTGAAGAGTT GAAGGGTGAC CTGCTGGTAC AGCTGGGTCG CGCCGACGAC
GCGCACAGCG CTTACGAAAA AGCCAAGGCT GCGCTGTCCG ATGACGCGGC GGTCGGTGGC
CTGCAATTGA AGCTGGATGA CCTGGCTAAA GGGGACGCGT AA
 
Protein sequence
MSSTDDDDLA GVKDWWNRNG KPLLTGALLA GVVVLGWNTW HKYQNNQSQG ASQLYQALLE 
TSLTPTGQPD ATKVAELSGK LKSEFGGTAY AQYGSLFVAK VAVETGKLDD AAAELKSVLD
KPADVTLGEI SRQRLARVLA AQNKAEDALK LLDGDADKAF LASREELKGD LLVQLGRADD
AHSAYEKAKA ALSDDAAVGG LQLKLDDLAK GDA