Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0898 |
Symbol | |
ID | 5868658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1028259 |
End bp | 1028900 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545999 |
Product | hypothetical protein |
Protein accession | YP_001667144 |
Protein GI | 167031913 |
COG category | [S] Function unknown |
COG ID | [COG2976] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.930556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000414617 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCGAGTA CCGATGATGA TGACCTGGCA GGGGTCAAGG ACTGGTGGAA CCGCAACGGC AAGCCGCTGC TGACCGGCGC ATTGCTGGCT GGCGTGGTGG TGCTGGGCTG GAATACCTGG CACAAGTACC AGAACAACCA GTCGCAAGGT GCCTCGCAGC TGTATCAGGC TTTGCTTGAA ACCAGCCTGA CGCCGACTGG CCAGCCAGAC GCCACCAAGG TCGCGGAGCT GTCCGGCAAG CTCAAGAGCG AGTTCGGCGG CACCGCCTAC GCCCAGTACG GCAGCCTGTT CGTGGCCAAG GTAGCGGTCG AGACCGGCAA GCTCGACGAC GCTGCCGCCG AGCTGAAAAG CGTGCTGGAC AAGCCGGCCG ACGTGACCCT GGGCGAGATT TCGCGCCAGC GTCTGGCTCG CGTACTGGCC GCCCAGAACA AGGCCGAGGA CGCCCTGAAG CTGCTTGACG GCGACGCCGA CAAAGCCTTC CTGGCCAGCC GTGAAGAGTT GAAGGGTGAC CTGCTGGTAC AGCTGGGTCG CGCCGACGAC GCGCACAGCG CTTACGAAAA AGCCAAGGCT GCGCTGTCCG ATGACGCGGC GGTCGGTGGC CTGCAATTGA AGCTGGATGA CCTGGCTAAA GGGGACGCGT AA
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Protein sequence | MSSTDDDDLA GVKDWWNRNG KPLLTGALLA GVVVLGWNTW HKYQNNQSQG ASQLYQALLE TSLTPTGQPD ATKVAELSGK LKSEFGGTAY AQYGSLFVAK VAVETGKLDD AAAELKSVLD KPADVTLGEI SRQRLARVLA AQNKAEDALK LLDGDADKAF LASREELKGD LLVQLGRADD AHSAYEKAKA ALSDDAAVGG LQLKLDDLAK GDA
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