Gene PputGB1_0888 details

Gene Information

• Locus tag: PputGB1_0888
• Symbol: hscB
• ID: 5868648
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida GB-1
• Kingdom: Bacteria
• Replicon accession: NC_010322
• Strand: +
• Start bp: 1019314
• End bp: 1019835
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641545989
• Product: co-chaperone HscB
• Protein accession: YP_001667134
• Protein GI: 167031903
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.000155691
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGGGTACTC CTTGTCATTA CGCATTGTTT GACCTCCAGC CAAGCTTCCG CCTGGATCTC 
GACAAGCTGG CCACTCGCTA TCGCGAGCTG GCCCGCGAAG TCCATCCCGA CCGCTTTGCC 
GACGCCTCCG AGCGAGAGCA ACGTATAGCG CTGGAAAAAT CCGCGGCCCT CAACGACGCC 
TACCAGACGC TGCGCAGTGC GCCGCGTCGC GCGCGCTACC TGCTGGCCAT CAGCGGCCAC 
GAAGTGCCCC AGGAGGTCAC GGTCCACGAC CCCGACTTCC TGCTGCAGCA GATGCAGTGG 
CGTGAAGAGC TCGAAGAGCT GCAGGACGAA GCCGACCTTG ATGGTGTCGG TGTGTTCAAG 
AAGCGCCTGA AGTTCGCCCA GGACACGCTG AACGAGGACT TTGCCGCCTG CTGGGATGCC 
CCAGGCGAGC GCGACAAGGC CGAGCGCCTG ATGCGCCGCA TGCAGTTCCT CGACAAGCTC 
GCCCAAGAAG TGCGCCAACT GGAAGAGCGC CTCGACGATT AA 

 

Protein sequence

MGTPCHYALF DLQPSFRLDL DKLATRYREL AREVHPDRFA DASEREQRIA LEKSAALNDA 
YQTLRSAPRR ARYLLAISGH EVPQEVTVHD PDFLLQQMQW REELEELQDE ADLDGVGVFK 
KRLKFAQDTL NEDFAACWDA PGERDKAERL MRRMQFLDKL AQEVRQLEER LDD