Gene PputGB1_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0886 
Symbol 
ID5868646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1018570 
End bp1018956 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content58% 
IMG OID641545987 
Productscaffold protein 
Protein accessionYP_001667132 
Protein GI167031901 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.272267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000151152 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATACA GTGAAAAGGT CATCGACCAC TACGAAAACC CACGCAACGT CGGCAAGATG 
AATGCCGAGG ACCCGGATGT CGGTACCGGC ATGGTCGGCG CTCCAGCGTG CGGTGACGTG
ATGCGTCTGC AGATCAAGGT CAACGAGCAA GGCGTTATCG AAGACGCCAA GTTCAAGACC
TACGGCTGCG GTTCGGCCAT CGCTTCCAGC TCCCTCGCCA CCGAGTGGAT GAAGGGCAAG
ACCCTGGACG AAGCCGAAAC CATCAAGAAC ACCCAGCTGG CCGAAGAACT GGCGTTGCCG
CCGGTCAAGA TCCACTGCTC GGTACTCGCC GAGGATGCCA TCAAGGCAGC CGTGCGCGAT
TACAAGCAGA AGAAAGGCTT GATCTAA
 
Protein sequence
MAYSEKVIDH YENPRNVGKM NAEDPDVGTG MVGAPACGDV MRLQIKVNEQ GVIEDAKFKT 
YGCGSAIASS SLATEWMKGK TLDEAETIKN TQLAEELALP PVKIHCSVLA EDAIKAAVRD
YKQKKGLI