Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0883 |
Symbol | |
ID | 5868643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1015806 |
End bp | 1016591 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545984 |
Product | serine O-acetyltransferase |
Protein accession | YP_001667129 |
Protein GI | 167031898 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1045] Serine acetyltransferase |
TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.25583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00547616 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCGAAC GCCTGCGTGA AGATATTCAA AGCGTATTCC ACCGTGACCC GGCTGCGCGC AATGCCTTCG AGGTGCTCAC CTGCTACCCC GGCATGCACG CCATCTGGCT GCACCGCCTG GGCAACGCCC TGTGGAAGCG TGATTTCAAA TGGCTGGCCC GCCTGGTGTC GAACTTTGGC CGTTGGCTGA CCGGCATCGA GATCCATCCC GGCGCCACCA TCGGTCGGCG CTTTTTCATT GACCACGGCA TGGGCATCGT CATTGGCGAA ACCGCCGAAA TTGGCGATGA CGTCACCCTT TACCAGGGTG TGACGCTGGG CGGTACCAGC TGGAATAAAG GCAAGCGCCA CCCCACCCTG GAAAACGGTG TGGTGGTAGG GGCGGGGGCC AAGGTGCTGG GGCCGTTCAC CGTCGGTGCC GGGGCCAAGA TCGGCTCCAA CGCCGTGGTG ACCAAGGCGG TGCCGGCCGG GGCCACGGCG GTGGGTATTC CCGGGCGAAT CATCGTCAAG AGCGAAGACA CCGAAGTCGA GGCCAAGCGC AAGGCCATGG CCGAGAAGAT CGGCTTCGAT GCCTACGGTG TCAGCGGCGA CATGCCCGAC CCGGTGGCGC GTGCCATCGG CCAGATGCTC GACCATCTGC AGGCGGTCGA CGAGCGGTTG GAGGGTATGT GCGGTGCCCT GACCAAGATG GGCAGTGACT ACTGTGCCAA GGAACTGCCG GCCTTGCCGG AGGATGACTT CACCGAAGCC GCCCTGGTGG CCAAGCGCGA CACTCAGTCG CATTGA
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Protein sequence | MFERLREDIQ SVFHRDPAAR NAFEVLTCYP GMHAIWLHRL GNALWKRDFK WLARLVSNFG RWLTGIEIHP GATIGRRFFI DHGMGIVIGE TAEIGDDVTL YQGVTLGGTS WNKGKRHPTL ENGVVVGAGA KVLGPFTVGA GAKIGSNAVV TKAVPAGATA VGIPGRIIVK SEDTEVEAKR KAMAEKIGFD AYGVSGDMPD PVARAIGQML DHLQAVDERL EGMCGALTKM GSDYCAKELP ALPEDDFTEA ALVAKRDTQS H
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