Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0875 |
Symbol | queA |
ID | 5868635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1007906 |
End bp | 1008955 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641545976 |
Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
Protein accession | YP_001667121 |
Protein GI | 167031890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.409105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTCG CCGATTTCTC CTTCGAACTC CCTGATTCCC TGATCGCCCG CCACCCGTTG GCCGAGCGCC ATGGCAGCCG TCTGCTGGTG CTCGATGGGC CGACCGGCGC GCTTTCGCAC CGGCAATTCC CCGACCTGCT CGACTACCTG CGCCCCGGCG ACCTGATGGT GTTCAACAAC ACCCGGGTGA TCCCAGCGCG GTTGTTTGGC CAGAAAGCCT CCGGCGGCAA GCTGGAAGTG CTGGTCGAGC GCGTGCTCGA CAGCCACCGG GTGCTGGCCC ATGTGCGTGC CAGCAAGGCG CCGAAAGTGG GCGCGGTCAT CCTCATCGAT GGCGGTGGCG AGGCCGAGAT GGTCGCGCGT CACGATACGC TGTTCGAACT GCGCTTCACC GAAGAAGTGC TGCCGCTGCT CGACCGTGTC GGCCACATGC CGCTACCGCC GTACATCGAC CGGCCCGACG AGGGCGCCGA CCGTGAGCGC TACCAGACTG TGTACGCCCA GCGCGCCGGT GCGGTCGCCG CGCCTACCGC AGGCCTGCAC TTCGACGAGG CGCTGCTTGA AAAGATCGCC GCCAAGGGCG TCGAGCGAGC CTTCGTCACC TTGCACGTGG GCGCCGGCAC CTTCCAGCCG GTGCGGGTCG ACAAGATCGA AGACCACCAC ATGCATAAAG AGTGGCTCGA AGTGGGCCAG GATGTGGTCG ATGCCATCGA GGCCTGTCGG GCCCGTGGTG GTCGAGTGGT TGCGGTCGGC ACCACCAGCG TGCGCTCGCT GGAGAGCGCC GCGCGCGATG GCGTGCTCAA GGCCTTCAGT GGCGATACCG ACATCTTCAT CTACCCGGGC CGGCCGTTCC ATGTGGTCGA TGCCCTGGTC ACCAACTTCC ACCTGCCGGA GTCCACGCTG CTGATGCTGG TCTCGGCCTT CGCCGGCTAC CCCGAGACCA TGGCCGCCTA CGCGGCGGCG GTCGAGCACG GGTACCGCTT CTTCAGTTAC GGTGATGCCA TGTTCATCAC CCGCAATCCG GCGCCACGCG GCCCCGAGGA TCAAGCATGA
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Protein sequence | MRVADFSFEL PDSLIARHPL AERHGSRLLV LDGPTGALSH RQFPDLLDYL RPGDLMVFNN TRVIPARLFG QKASGGKLEV LVERVLDSHR VLAHVRASKA PKVGAVILID GGGEAEMVAR HDTLFELRFT EEVLPLLDRV GHMPLPPYID RPDEGADRER YQTVYAQRAG AVAAPTAGLH FDEALLEKIA AKGVERAFVT LHVGAGTFQP VRVDKIEDHH MHKEWLEVGQ DVVDAIEACR ARGGRVVAVG TTSVRSLESA ARDGVLKAFS GDTDIFIYPG RPFHVVDALV TNFHLPESTL LMLVSAFAGY PETMAAYAAA VEHGYRFFSY GDAMFITRNP APRGPEDQA
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