Gene PputGB1_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0875 
SymbolqueA 
ID5868635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1007906 
End bp1008955 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content67% 
IMG OID641545976 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001667121 
Protein GI167031890 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.409105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG CCGATTTCTC CTTCGAACTC CCTGATTCCC TGATCGCCCG CCACCCGTTG 
GCCGAGCGCC ATGGCAGCCG TCTGCTGGTG CTCGATGGGC CGACCGGCGC GCTTTCGCAC
CGGCAATTCC CCGACCTGCT CGACTACCTG CGCCCCGGCG ACCTGATGGT GTTCAACAAC
ACCCGGGTGA TCCCAGCGCG GTTGTTTGGC CAGAAAGCCT CCGGCGGCAA GCTGGAAGTG
CTGGTCGAGC GCGTGCTCGA CAGCCACCGG GTGCTGGCCC ATGTGCGTGC CAGCAAGGCG
CCGAAAGTGG GCGCGGTCAT CCTCATCGAT GGCGGTGGCG AGGCCGAGAT GGTCGCGCGT
CACGATACGC TGTTCGAACT GCGCTTCACC GAAGAAGTGC TGCCGCTGCT CGACCGTGTC
GGCCACATGC CGCTACCGCC GTACATCGAC CGGCCCGACG AGGGCGCCGA CCGTGAGCGC
TACCAGACTG TGTACGCCCA GCGCGCCGGT GCGGTCGCCG CGCCTACCGC AGGCCTGCAC
TTCGACGAGG CGCTGCTTGA AAAGATCGCC GCCAAGGGCG TCGAGCGAGC CTTCGTCACC
TTGCACGTGG GCGCCGGCAC CTTCCAGCCG GTGCGGGTCG ACAAGATCGA AGACCACCAC
ATGCATAAAG AGTGGCTCGA AGTGGGCCAG GATGTGGTCG ATGCCATCGA GGCCTGTCGG
GCCCGTGGTG GTCGAGTGGT TGCGGTCGGC ACCACCAGCG TGCGCTCGCT GGAGAGCGCC
GCGCGCGATG GCGTGCTCAA GGCCTTCAGT GGCGATACCG ACATCTTCAT CTACCCGGGC
CGGCCGTTCC ATGTGGTCGA TGCCCTGGTC ACCAACTTCC ACCTGCCGGA GTCCACGCTG
CTGATGCTGG TCTCGGCCTT CGCCGGCTAC CCCGAGACCA TGGCCGCCTA CGCGGCGGCG
GTCGAGCACG GGTACCGCTT CTTCAGTTAC GGTGATGCCA TGTTCATCAC CCGCAATCCG
GCGCCACGCG GCCCCGAGGA TCAAGCATGA
 
Protein sequence
MRVADFSFEL PDSLIARHPL AERHGSRLLV LDGPTGALSH RQFPDLLDYL RPGDLMVFNN 
TRVIPARLFG QKASGGKLEV LVERVLDSHR VLAHVRASKA PKVGAVILID GGGEAEMVAR
HDTLFELRFT EEVLPLLDRV GHMPLPPYID RPDEGADRER YQTVYAQRAG AVAAPTAGLH
FDEALLEKIA AKGVERAFVT LHVGAGTFQP VRVDKIEDHH MHKEWLEVGQ DVVDAIEACR
ARGGRVVAVG TTSVRSLESA ARDGVLKAFS GDTDIFIYPG RPFHVVDALV TNFHLPESTL
LMLVSAFAGY PETMAAYAAA VEHGYRFFSY GDAMFITRNP APRGPEDQA