| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0859 |
|---|
| Symbol | |
|---|
| ID | 5868618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 990762 |
|---|
| End bp | 991733 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641545959 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_001667105 |
|---|
| Protein GI | 167031874 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCCGT CCCGTATCGA GCAGGAGGCC GCCGAGTGGG CCCTGTGCCT GGGGGAGGGC
GAACTGGGTG CCACCGAGGC GCGTGAGTTC GAGGCCTGGC TGCAGGCCGA CCCGCGCCAC
GGTGCGACCT TGCGGCGCAT GCAAGGGGTG ATCAGCCAGA TGCATGCCCT GCGCCAGCAA
CGCGGGCCGG TTGGCGCAGG GTTACGCGCC GGCATGCAGC CCTCGGCGCC ACGCTCGGTG
GCGCGGCGCA CCTTGCTCGG CCTGGTGCTG GCGGGTTCGT TGCTGGGCAC CTTGCCGCTT
GCCGGTGTGT CGCCACGAGA CTGGCTAGCC GACCTGCACA CCGCGCCGGC CGAGTGGCAC
AGTCAAACCC TGAGCGATGG CTCGCAACTG ACTTTGGCGG GCAATTCCGC CGTGGATGTC
GAGTTCAGTG CTGGCGAGCG GCGTATCCGC CTGCTGCACG GCCAGGTACT GGTGGATGTC
AGCCATGACC CGGCGCGGCC GTTCGTGGTG CAAACCGACG AGGGCAGCTT CAAGGCCTTG
GGTACTCGCT TCGTGGTCGG CCAAGGGCGC GAACGCAGCG AGCTGACCAT GCTCGAATCC
CGTGTCGAGG CGCGCAGTGC CGTGTCCGGC GATCAACTGG TCGCGGGGCG CGGTGAGCGG
GCCTGGGTGG CACGCGACGG GCTTGGCCCG CTGCCGGCTA TCGATCCGGC ACGTGTGGAC
CAAGCCTGGC AGCGTCACCA ATTGGTGGCC GAAGGCGTGC CGCTCGATCA GGTGTTGGAC
GCGTTGTCGC AGCAAAGGCG CGGCGTGCTG CGCTTCGACC GCCAGGCAAT GCAGGCCATC
AAGGTGTCGG CGGTACTGCC GCTGGATGAC AGCGAACGCG CCCTGAGACT GCTGGCCGAA
GCGCTGCCGA TTCGCATCGG TGGTTTTGGT CGCTGGTGGA CCACGGTCGA GCCAGCGCCG
CGAGAAAATT GA
|
|---|
| Protein sequence | MNPSRIEQEA AEWALCLGEG ELGATEAREF EAWLQADPRH GATLRRMQGV ISQMHALRQQ
RGPVGAGLRA GMQPSAPRSV ARRTLLGLVL AGSLLGTLPL AGVSPRDWLA DLHTAPAEWH
SQTLSDGSQL TLAGNSAVDV EFSAGERRIR LLHGQVLVDV SHDPARPFVV QTDEGSFKAL
GTRFVVGQGR ERSELTMLES RVEARSAVSG DQLVAGRGER AWVARDGLGP LPAIDPARVD
QAWQRHQLVA EGVPLDQVLD ALSQQRRGVL RFDRQAMQAI KVSAVLPLDD SERALRLLAE
ALPIRIGGFG RWWTTVEPAP REN
|
|---|
| |