Gene PputGB1_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0852 
Symbol 
ID5868611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp984980 
End bp985312 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content54% 
IMG OID641545952 
Productcytochrome o ubiquinol oxidase subunit IV 
Protein accessionYP_001667098 
Protein GI167031867 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACG CACACGACAC TCATCACGAA GGTAACCACG GCAGCGTCAA GTCGTACATG 
ATCGGCTTCG TACTGTCGAT TATCCTGACT GCGATCCCGT TCGGCCTGGC CATGACCGCC
AGCCTGCCGA AGAACCTGAC CGTACTGATC ATCGTTGCCA TGGCCGTGAT CCAGGTAGTT
GTTCACCTGG TTTACTTCCT GCACATGGAC CGCTCGAAAG AGCAACGCAA CAACGTATCG
ACGTTCCTGT TCACCACCAT GGTGATCGCT CTGCTTGTCG GCCTGTCGCT GTGGATCATG
TTCAGCATCC ACTTCGAAAT GTTGGCCAAG TGA
 
Protein sequence
MANAHDTHHE GNHGSVKSYM IGFVLSIILT AIPFGLAMTA SLPKNLTVLI IVAMAVIQVV 
VHLVYFLHMD RSKEQRNNVS TFLFTTMVIA LLVGLSLWIM FSIHFEMLAK