Gene PputGB1_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0851 
Symbol 
ID5868610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp984354 
End bp984980 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content58% 
IMG OID641545951 
Productcytochrome o ubiquinol oxidase, subunit III 
Protein accessionYP_001667097 
Protein GI167031866 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTC AAGTAATGCA CGGCGGCGCT GCTCATGGTC ACGACCATGG GCATGACGAC 
CACCACCACG ACTCGGGCCA GATGACCGTA CTGGGCTTCT GGCTGTACCT GATGACCGAC
TGCATCCTGT TTGCGTCGCT CTTCGCCACC TACGCGGTGC TGTCCGGCAG TTTTGCCGGC
GGCCCGTCGG GTCATGACAT CTTCCAGCTC GATTTCGTAG CTGTTGAAAC GCTGTTCCTG
CTGCTGTCCT CGATCACCTT CGGCTTCGCC ATGCTGAAGA TGTTCGATGG CAAGAAAGCG
GGTGTACTGG GCTGGTTGGC TGTGACCTTC CTGTTCGGTG CAGGCTTCAT CGCGATGGAA
ATCTATGAAT TCCATCACCT GATCAGCGAA GGCTTCGGCC CGCAGCGCAG TGGCTTCCTG
TCGGGCTTCT TCGCCCTGGT AGGTACCCAC GGTCTGCACG TGACTGCTGG TCTGATCTGG
ATGGCAATCA TGATGTACCA GATCAACAAG CACGGCATCA CGCCGACCGC CAAGACCCGC
ATGAGCTGCC TGAGCCTGTT CTGGCACTTC CTGGACGTGG TCTGGATCTG CGTATTCACC
GTCGTTTACC TGCTGGGAGT TCTGTAA
 
Protein sequence
MSSQVMHGGA AHGHDHGHDD HHHDSGQMTV LGFWLYLMTD CILFASLFAT YAVLSGSFAG 
GPSGHDIFQL DFVAVETLFL LLSSITFGFA MLKMFDGKKA GVLGWLAVTF LFGAGFIAME
IYEFHHLISE GFGPQRSGFL SGFFALVGTH GLHVTAGLIW MAIMMYQINK HGITPTAKTR
MSCLSLFWHF LDVVWICVFT VVYLLGVL