Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0850 |
Symbol | |
ID | 5868609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 982332 |
End bp | 984350 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641545950 |
Product | cytochrome o ubiquinol oxidase, subunit I |
Protein accession | YP_001667096 |
Protein GI | 167031865 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGTA AACTAAGCCT GGAGGCGATA CCCTATCACG AGCCGATAGT CATGGTGACG CTTGCCATGA TCGCGCTCGG CGGTATCGCT GTCGTCGGTC TTATCACCTA TTTCCGCAAG TGGACCTACT TGTGGAGCGA GTGGCTGACT ACTGTCGACC ACAAAAAGAT CGGCGTGATG TACATCATCG TCGCGATGAT CATGCTGCTG CGCGGCTTTG CCGACGCCAT CATGATGCGT ACCCAGCTGG CTGCCGCAAC CGGTGGCTCC GAAGGCTACC TGCCGCCTGA ACACTATGAC CAGATCTTCA CCGCTCACGG TGTGATCATG ATCATCTTCA TGGCGATGCC GTTCTTCACC GGCCTGATGA ACCTGGCGGT TCCTCTGCAG ATCGGTGCAC GTGACGTTGC CTTCCCGTTC CTGAACTCCC TGAGCTTCTA CCTGCTGCTG GCAGGCGTGC TGCTGGTCAA CATCTCGCTG GGCGTTGGTG AATTCGCCAA GACCGGCTGG GTTGCCTATC CGCCGCTCGC GGGCATTCAG TACAGCCCTG GGGTGGGTGT CGACTACTAC ATCTGGGCGC TACAGCTATC CGGATTGGGT ACGACGCTTA CCGGCGTGAA CTTCCTCGTC ACCGTGATGA AGATGCGCGC ACCTGGCATG AAGCTGATGG ACATGCCGAT CTTCACCTGG ACCTGCACCT GGGCCAACGT ACTGATCGTC GCTTCGTTCC CGATTCTGAC CGCTGCACTC GCACTGCTGA CTGTTGACCG TTATCTGGAC TTCCACATTT TCACCAACGA GCTTGGTGGG AACCCGATGA TGTACGTCAA CCTGTTCTGG GCGTGGGGTC ACCCTGAGGT TTACATCCTG ATCCTGCCGG CCTTCGGCGT GTTCTCGGAA GTGACTTCGA CGTTCTCTGG CAAACGCCTG TTCGGCCACC ACTCGATGAT CTACGCATCG GGCGCGATCG CCATCCTGGG CTTTGCGGTA TGGCTGCACC ACTTCTTCAC CATGGGTGCC GGCGCCAGCG TCAACACCTT CTTCGGCCTG GCGACGATGC TGATCTCCAT CCCGACCGGT GTGAAGCTGT TCAACTGGCT GTTCACCATG TACCAAGGCC GTGTGCGCTT CACCGCACCG ATGCTCTGGA CCCTGGGCTT CATGGTCACC TTCTCCATCG GTGGCATGAC CGGCGTACTG CTGGCCGTTC CGGGTGCTGA CTTCGTTCTG CACAACAGCC TGTTCGTTAT TGCGCACTTC CACAACGTGA TCATCGGTGG CGCGGTATTC GGCTACATCG CCGGTTTCGC CTTCTGGTTC CCGAAAGCCT TCGGCTTCAC CCTGAACGAG AAGTGGGGCA AAGCTGCCTT CTGGTTCTGG CTGTCGGGCT TCTACGTTGC GTTCATGCCG CTGTACGCCC TGGGCTTCAT GGGCATGACC CGTCGTCTGA ACCACTCCGA CAACCCACTG TGGGAACCCT ACCTGTACGT AGCCGTTGTC GGCGCCGTGC TGATCCTGTT CGGTATCGCT TGCCAGCTGA TCCAGCTGTA CGTATCGGTT CGCGACCGCA ACCAGAACCT GGACGTGACC GGCGACCCAT GGGGCGGCCG TACCCTGGAA TGGTCGACTT CGTCGCCACC TCCGTTCTAC AACTTCGCCC ACATGCCTGA GCAGGTTGGC CTGGATGCAT GGCACGAAAC CAAGGAAACC GGCAAGGCTT ACAAGCCGGC GACCAAGTTC GACGCCATCC ACATGCCAAG CAACACCTCG ACGGGTCTGT TCATGGGCCT GTTCCTGACC GTCTTCGGCT TTGCCTTCAT CTGGCACATC TGGTGGCTGG TTGGCGCAAG CCTGGTTGCA ACCATCGCTG TCTTCGTTCG CCACGCTGCC CGTGACGACC AGGGCTACAT GGTTCCGGCC GAAGAAGTGG CGCGCATCGA AGGCGAGCGT ATGAAAGCGC TGGCCAAAGC AGGTGCTCTG CCTGCCGGCG CACGTGTCGA ATCGTTTGAG CGGGTGTAA
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Protein sequence | MFGKLSLEAI PYHEPIVMVT LAMIALGGIA VVGLITYFRK WTYLWSEWLT TVDHKKIGVM YIIVAMIMLL RGFADAIMMR TQLAAATGGS EGYLPPEHYD QIFTAHGVIM IIFMAMPFFT GLMNLAVPLQ IGARDVAFPF LNSLSFYLLL AGVLLVNISL GVGEFAKTGW VAYPPLAGIQ YSPGVGVDYY IWALQLSGLG TTLTGVNFLV TVMKMRAPGM KLMDMPIFTW TCTWANVLIV ASFPILTAAL ALLTVDRYLD FHIFTNELGG NPMMYVNLFW AWGHPEVYIL ILPAFGVFSE VTSTFSGKRL FGHHSMIYAS GAIAILGFAV WLHHFFTMGA GASVNTFFGL ATMLISIPTG VKLFNWLFTM YQGRVRFTAP MLWTLGFMVT FSIGGMTGVL LAVPGADFVL HNSLFVIAHF HNVIIGGAVF GYIAGFAFWF PKAFGFTLNE KWGKAAFWFW LSGFYVAFMP LYALGFMGMT RRLNHSDNPL WEPYLYVAVV GAVLILFGIA CQLIQLYVSV RDRNQNLDVT GDPWGGRTLE WSTSSPPPFY NFAHMPEQVG LDAWHETKET GKAYKPATKF DAIHMPSNTS TGLFMGLFLT VFGFAFIWHI WWLVGASLVA TIAVFVRHAA RDDQGYMVPA EEVARIEGER MKALAKAGAL PAGARVESFE RV
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