| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0843 |
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| Symbol | |
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| ID | 5868602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 956831 |
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| End bp | 958999 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641545943 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001667089 |
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| Protein GI | 167031858 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC CGATCAATGT AACCCTGCCC AACCAGGCGC CTGCCCCAGC GGCCGAAGAA
GCTCATCGGC CAGACCTTGG GCCGTGGCTG GAAGTGATGC TTCAGGTCGC ACACCACTAC
CGCCTGGACG TGTCGCCCCA GCGCATTCGC CTGGCCGCCG TGGAGGATGC TCGCCCACTG
GACGAAATCC TCCGGCACAT GGCCCGTCAG GCCGGGCTGG CCCTGCGCTT CGTGCGCTTC
GATGCCAAGG GCCTGCGGCA ATGGCGCACG CCGCTGGTGC TGGAGCTGGA CGATGGCCAG
CTGGCAGTGG TCGAGTCGGT GACCGAAGAG GACGACGTGG CGGTGGTATT CGCCGGCGAC
CAGGGCCTGA CCTCGCGCCT GCCACGCGAC ACCCTCAAGG GCCGCATCAA CCGCGTTGCC
CTGCTGCGCC CGGCAAGGCC GCTGCGTGAC GTGCGCACCG ACGACTACAC CGCGCCCTAC
GACCGCCACT GGTTCGCCCG CATCGTGCTG CGCGACCTGC GCCCCTATGG CCAGGTGATG
GTCGCCTCGC TGGTGGCCAA CGTGCTGGCG CTGGCCGGGG TGCTGTTCTC GATGCAGGTG
TACGACCGGG TGATCCCGGC CGAATCCCTG CCAACCCTTT ACGTGCTGTT TGGTGGCGTG
GTGCTGGCAC TGGTGTTCGA CTTCAGCATG CGCCTGCTGC GGCTGAAGGT GACCGACCTG
CTCGGCAAAC GCGCCGACTT GCGGGTAAGC GACCTGGTCT ACGGGCATGC CCTGCGCCTG
CGCAACTCGG TGCGGCCGAA ATCCACTGGC TCGTTCATCT CGCAACTGCG CGAACTGGAG
TCGATCCGCG ATCTGATCAC CTCAAGCACC GCCACGGCGC TGGCCGATCT GCCGTTCTTT
CTGCTGTTCC TGTTGGTGTT CTGGCTGATC GGCGGCGTGC TGGTGTTCAT CCCACTGGTC
GCGTTGCTGG CCATGGTCCT ACCCGGGTTG CTCGCGCAAC GGCGCCTGGC ACGGCTGGCC
AATGCCTCGA TGCGCGAGTC GGCGCTGCGC AACGCCATGC TGGTAGAGAG CATCCAGGGC
CTGGACGAGA TCAAGGCACT GCAGGCCGAG GCACGCTTCG AGCGGCAGTG GAACCAGTAC
AACGCGGCTT GCGCGCACAC CAACCTGCGC CTGCGCACCC TCACCAACGG CCTGGTGACC
TGGACGCAGA ACGTGCAGGG CGCGGTGTTC GCCGTGGTCA TCGTGATCGG TGCACCCATG
GTCATCGCCG GCGACCTCAC GACCGGTAGC CTGGTGGCGG CGTCGATGCT GTCGTCGCGG
ATGATGGCCC CGCTGGCGCA ACTGACCCAT GTGCTGACCC GCTGGCAGCA AGCCAAGGTA
GCCCTCCAGG GCCTGGACAA GCTGATGCAG TCGCCGGTCG ACCACCCCGA AGGCGAAGCC
CGCGTGCACC TGCCGGCCAT CCGTGGCGAG TACCGCTTGC GCCAGGCCAA CTTCCGCTAC
AGCGAAGAGT CCCCACCGGT ACTGAACATC GGCCAGCTGG ATATCCAGCC GGGCGAGCGC
ATTGCCGTGC TTGGGCGCAA CGGTGCTGGC AAATCGACCT TGCTGCAAGC CTTGGGCGGG
GCCATGGACC TGGTACAAGG CGAGATCAGC CTGGACGGCA TCGCCATGGC CCACCTCGAC
CCTGCCGACC TACGCCGTGA TGTGGGCCTG CTGCCGCAAT ACGCGCGGCT GTTCCACGGC
ACCCTGCGGG AAAACCTCAC CCTCGGCGCC GGCCAGGCCA GCGACCAGGA ACTGGTGGCC
GCGCTGGCCG CCACCGGCGC GCTGGACTTC GTCCGCCGTC TGCCCAAGGG CATGGACCAC
CTGATCCTCG AAGGCGGCCT GGGCTTGTCC GGCGGCCAAC GCCAGGCCCT GGTGCTGTCG
CGCCTGCTGG TGCGCCAGCC GCAGGTGCTG CTGCTGGACG AGCCGACCGC GTCGCTGGAC
GACATGACCG AGCGCAAGCT GCTGGATAAC CTCGAACGCT TCTGCCAGGG CCGCACCCTG
GTGATCGCCA CCCACCGTCT GAGCGTGCTG CAACGGGTCG ACCGCATTCT GGTGCTGGAT
GCCGGGCGCA TCGTCATCGA CGACGCGCGC GACGCCGCCC TGGCCAAACT GCAAGGAGCC
CAGGCATGA
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| Protein sequence | MSDPINVTLP NQAPAPAAEE AHRPDLGPWL EVMLQVAHHY RLDVSPQRIR LAAVEDARPL
DEILRHMARQ AGLALRFVRF DAKGLRQWRT PLVLELDDGQ LAVVESVTEE DDVAVVFAGD
QGLTSRLPRD TLKGRINRVA LLRPARPLRD VRTDDYTAPY DRHWFARIVL RDLRPYGQVM
VASLVANVLA LAGVLFSMQV YDRVIPAESL PTLYVLFGGV VLALVFDFSM RLLRLKVTDL
LGKRADLRVS DLVYGHALRL RNSVRPKSTG SFISQLRELE SIRDLITSST ATALADLPFF
LLFLLVFWLI GGVLVFIPLV ALLAMVLPGL LAQRRLARLA NASMRESALR NAMLVESIQG
LDEIKALQAE ARFERQWNQY NAACAHTNLR LRTLTNGLVT WTQNVQGAVF AVVIVIGAPM
VIAGDLTTGS LVAASMLSSR MMAPLAQLTH VLTRWQQAKV ALQGLDKLMQ SPVDHPEGEA
RVHLPAIRGE YRLRQANFRY SEESPPVLNI GQLDIQPGER IAVLGRNGAG KSTLLQALGG
AMDLVQGEIS LDGIAMAHLD PADLRRDVGL LPQYARLFHG TLRENLTLGA GQASDQELVA
ALAATGALDF VRRLPKGMDH LILEGGLGLS GGQRQALVLS RLLVRQPQVL LLDEPTASLD
DMTERKLLDN LERFCQGRTL VIATHRLSVL QRVDRILVLD AGRIVIDDAR DAALAKLQGA
QA
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