| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0832 |
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| Symbol | |
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| ID | 5868591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 943256 |
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| End bp | 944746 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545932 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001667078 |
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| Protein GI | 167031847 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC AATCCCCGCG TTTCCCAGTC TACAGGTCGC ACCCCGAACT GATCCTCAAC
CTGGGCAGTT GCCTTGCCGT GCTCGCCATC GTGGCTATCG TCAGCTACCT GCTGGCCCGC
GAGCGCGACA GCGTCGAGCT GTCGGCGGTG CGCGCGTCGA ACAACATCGT CCAGCTGATC
GAAAGCGACA TCCTGCGCAA CGCCGAACTG TACGACCAGT CGCTGCAAGG CCTGATCTGG
GCCGTCGGGC GCAAGGAGCT GGCGCAAACT CCTGGCCCAC TGCGCCAGCG CCTGCTGTTC
AATGAAGCGT TCGTCGACCG CAAGCGCGGT GACGTGCTGT GGCTGGACAA ACAAGGCAAC
GTCGTCGGCG ATTCCACCAG CAGCGTGCCG CGCAAGGCCA ACTTCGGCGA CACCGGGGTG
TTCAAGGCTC ACCAGCACAA TGCCAACCTC GGCCTGCTGG TAGGCCCGCC GTTCAAGGCC
AAGCTCGGCG ACCTGGACTG GTGCATCAGT TTCAGCCGGC GTATCTCCGG CCCCAATGGC
GAGTTCGCCG GGTTGGCGGC GGGTGCGCTG CGCCTGTCGT ACTTCAGTGA ACTGTTCCAG
CGCCTGGACA TCGGGGATGA CAGCAGCATC AACCTGTTCA ATACCGACGG GCAGTTGCTC
GCCCGCCAGC CCTCCCGCGT GCACGACCCG CTGATCGGCA GCAACTACGC CGAACGGCCC
AACTTCAAGC GCATCCTCAG TGAACGCAGC GGCAGCTTCA CCGCCCGCTC CGGCGGCAGC
GGCAAACCGC GCATGTATAC CTTCGCCCGT GTCGCGCAAT TGCCCCTGAT CGTGTTGGTG
GTGCACTCGG CCGACGAGGT GTTTGAATCC TGGCGCCGCA CCGCGATTCT GGTCAGCGTC
GCCACCGGGG TGCTGTGCGT CGGCATTCTC TGGCTGACGC TGCTGCTGGG TCGTGAATTG
CGCCGCCGCC ACGAAGCCGA AGAAGGCTTG GCCACGCTGG CGGCCACTGA CAGCCTGACG
GGCCTGGCCA ACCGCCGCCG ACTGGATCTG GTGTTGCGCC AGGAATGGGC GCGCGCCCAA
CGTAACCGCA AGCCACTGGC GGTGCTGATG GTCGATGTGG ACCATTTCAA GGCATTCAAC
CAACGCCATG GCCACGCCGG TGGCGACCAC GCCCTGCGCG AAGTGGCCAA GACTATCGAG
GCTTGTATCC GTCGCCCGGC GGACCTGGCT GCGCGCTATG GAGGGGAGGA GTTTCAGGTA
GTGCTGCCAG AAACCGACCT GGCCGGTGCG CAGCTGCTGG CTGAACGCAT CCGTGCGAGC
GTCGAGGCGC TGGCGCCGTT TGCCGATGAT GCCCACGCGG TTACGGTGAG CATTGGCATC
GGCCTGTCCG GCACCCAGCA TGACCTGAGC AGGGTGCTGG GTGCCGCGGA TGAAGCGCTC
TACCGGGCCA AAGCCAAAGG CCGCAACCGG GTAGAGAGCC CGGCCGATTA G
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| Protein sequence | MPTQSPRFPV YRSHPELILN LGSCLAVLAI VAIVSYLLAR ERDSVELSAV RASNNIVQLI
ESDILRNAEL YDQSLQGLIW AVGRKELAQT PGPLRQRLLF NEAFVDRKRG DVLWLDKQGN
VVGDSTSSVP RKANFGDTGV FKAHQHNANL GLLVGPPFKA KLGDLDWCIS FSRRISGPNG
EFAGLAAGAL RLSYFSELFQ RLDIGDDSSI NLFNTDGQLL ARQPSRVHDP LIGSNYAERP
NFKRILSERS GSFTARSGGS GKPRMYTFAR VAQLPLIVLV VHSADEVFES WRRTAILVSV
ATGVLCVGIL WLTLLLGREL RRRHEAEEGL ATLAATDSLT GLANRRRLDL VLRQEWARAQ
RNRKPLAVLM VDVDHFKAFN QRHGHAGGDH ALREVAKTIE ACIRRPADLA ARYGGEEFQV
VLPETDLAGA QLLAERIRAS VEALAPFADD AHAVTVSIGI GLSGTQHDLS RVLGAADEAL
YRAKAKGRNR VESPAD
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