Gene PputGB1_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0832 
Symbol 
ID5868591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp943256 
End bp944746 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content65% 
IMG OID641545932 
Productdiguanylate cyclase 
Protein accessionYP_001667078 
Protein GI167031847 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC AATCCCCGCG TTTCCCAGTC TACAGGTCGC ACCCCGAACT GATCCTCAAC 
CTGGGCAGTT GCCTTGCCGT GCTCGCCATC GTGGCTATCG TCAGCTACCT GCTGGCCCGC
GAGCGCGACA GCGTCGAGCT GTCGGCGGTG CGCGCGTCGA ACAACATCGT CCAGCTGATC
GAAAGCGACA TCCTGCGCAA CGCCGAACTG TACGACCAGT CGCTGCAAGG CCTGATCTGG
GCCGTCGGGC GCAAGGAGCT GGCGCAAACT CCTGGCCCAC TGCGCCAGCG CCTGCTGTTC
AATGAAGCGT TCGTCGACCG CAAGCGCGGT GACGTGCTGT GGCTGGACAA ACAAGGCAAC
GTCGTCGGCG ATTCCACCAG CAGCGTGCCG CGCAAGGCCA ACTTCGGCGA CACCGGGGTG
TTCAAGGCTC ACCAGCACAA TGCCAACCTC GGCCTGCTGG TAGGCCCGCC GTTCAAGGCC
AAGCTCGGCG ACCTGGACTG GTGCATCAGT TTCAGCCGGC GTATCTCCGG CCCCAATGGC
GAGTTCGCCG GGTTGGCGGC GGGTGCGCTG CGCCTGTCGT ACTTCAGTGA ACTGTTCCAG
CGCCTGGACA TCGGGGATGA CAGCAGCATC AACCTGTTCA ATACCGACGG GCAGTTGCTC
GCCCGCCAGC CCTCCCGCGT GCACGACCCG CTGATCGGCA GCAACTACGC CGAACGGCCC
AACTTCAAGC GCATCCTCAG TGAACGCAGC GGCAGCTTCA CCGCCCGCTC CGGCGGCAGC
GGCAAACCGC GCATGTATAC CTTCGCCCGT GTCGCGCAAT TGCCCCTGAT CGTGTTGGTG
GTGCACTCGG CCGACGAGGT GTTTGAATCC TGGCGCCGCA CCGCGATTCT GGTCAGCGTC
GCCACCGGGG TGCTGTGCGT CGGCATTCTC TGGCTGACGC TGCTGCTGGG TCGTGAATTG
CGCCGCCGCC ACGAAGCCGA AGAAGGCTTG GCCACGCTGG CGGCCACTGA CAGCCTGACG
GGCCTGGCCA ACCGCCGCCG ACTGGATCTG GTGTTGCGCC AGGAATGGGC GCGCGCCCAA
CGTAACCGCA AGCCACTGGC GGTGCTGATG GTCGATGTGG ACCATTTCAA GGCATTCAAC
CAACGCCATG GCCACGCCGG TGGCGACCAC GCCCTGCGCG AAGTGGCCAA GACTATCGAG
GCTTGTATCC GTCGCCCGGC GGACCTGGCT GCGCGCTATG GAGGGGAGGA GTTTCAGGTA
GTGCTGCCAG AAACCGACCT GGCCGGTGCG CAGCTGCTGG CTGAACGCAT CCGTGCGAGC
GTCGAGGCGC TGGCGCCGTT TGCCGATGAT GCCCACGCGG TTACGGTGAG CATTGGCATC
GGCCTGTCCG GCACCCAGCA TGACCTGAGC AGGGTGCTGG GTGCCGCGGA TGAAGCGCTC
TACCGGGCCA AAGCCAAAGG CCGCAACCGG GTAGAGAGCC CGGCCGATTA G
 
Protein sequence
MPTQSPRFPV YRSHPELILN LGSCLAVLAI VAIVSYLLAR ERDSVELSAV RASNNIVQLI 
ESDILRNAEL YDQSLQGLIW AVGRKELAQT PGPLRQRLLF NEAFVDRKRG DVLWLDKQGN
VVGDSTSSVP RKANFGDTGV FKAHQHNANL GLLVGPPFKA KLGDLDWCIS FSRRISGPNG
EFAGLAAGAL RLSYFSELFQ RLDIGDDSSI NLFNTDGQLL ARQPSRVHDP LIGSNYAERP
NFKRILSERS GSFTARSGGS GKPRMYTFAR VAQLPLIVLV VHSADEVFES WRRTAILVSV
ATGVLCVGIL WLTLLLGREL RRRHEAEEGL ATLAATDSLT GLANRRRLDL VLRQEWARAQ
RNRKPLAVLM VDVDHFKAFN QRHGHAGGDH ALREVAKTIE ACIRRPADLA ARYGGEEFQV
VLPETDLAGA QLLAERIRAS VEALAPFADD AHAVTVSIGI GLSGTQHDLS RVLGAADEAL
YRAKAKGRNR VESPAD