Gene PputGB1_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0823 
Symbol 
ID5868582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp933175 
End bp933747 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID641545923 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_001667069 
Protein GI167031838 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGG ACCGTGCCAC TGGCTGGTTC CACGGAATCG GAATCACCCA CTGCCCCTCG 
CCGAACTTCA ATGCGCGCCC AGAGGGCGAA TCGATTTCCC TGCTGGTGAT CCACAACATC
AGCTTGCCCC CGGCCTGTTT CGGCACCGGC AAGGTGCAGC AGTTCTTCCA GAACTGTCTG
GACCCCGATG AACATCCCTA CTTTGCCAGC ATCAACCATC TGACAGTGTC GGCGCACCTG
TTCGTCGAGC GTGACGGTGC GGTGACCCAG TTCGTATCGT TACGTGACCG CGCCTGGCAT
GCGGGGGTGT CGAGCTTCGA CGGGCGCGAG GGCTGCAATG ATTTTTCCAT CGGCATCGAA
CTGGAGGGCA CCGACGACCA GCCCTATACC GATGCCCAGT ACGCTGTGCT GGAGCAACTT
ACCCGGCACA TCCGCGATGC CTGGCCGGCC ATCGACCTGA GCCGCATCCA GGGCCATAGC
GACATTGCCC CGCAGCGCAA GACCGACCCC GGCCCGGCCT TCGATTGGCC GCGCTACCGT
CAGGCGCTGC AGCACAATGA GGATGAGGCA TGA
 
Protein sequence
MQLDRATGWF HGIGITHCPS PNFNARPEGE SISLLVIHNI SLPPACFGTG KVQQFFQNCL 
DPDEHPYFAS INHLTVSAHL FVERDGAVTQ FVSLRDRAWH AGVSSFDGRE GCNDFSIGIE
LEGTDDQPYT DAQYAVLEQL TRHIRDAWPA IDLSRIQGHS DIAPQRKTDP GPAFDWPRYR
QALQHNEDEA