Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0806 |
Symbol | |
ID | 5868565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 910827 |
End bp | 912713 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641545906 |
Product | hypothetical protein |
Protein accession | YP_001667052 |
Protein GI | 167031821 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCTG CAAACCTGTT CTGGCGCCGG GCCAAGTTGC CCTTGGCCGT CAGCCTTGCT TCCACGCTCG CAAGTCCTGC TTTCGCTGTC AGCTTCAACA TGGGTGAAAT CGAAGGCCAG TTCGACTCGT CGCTCTCCAT CGGCGCCAGC TGGTCGACGG CCAACCCCAA CAAGAACCTG ATCGGGGTGA ACAACGGCGG CAAGGGCCTG TCGCAGACAT CCGACGATGG CCACCTGAAC TTCAAGAAGG GCGAAACCTT CTCCAAGATC TTCAAAGGCA TCCATGACCT GGAGCTCAAG TACGGCGACA CCGGCGTGTT CGTGCGTGGC AAGTATTGGT ACGACTTCGA GCTGAAGGAC GAAGGCCGCG AGTTCAAGGA CATCAGCGAC TCCAACCGCA AGGAGGGCGC CAAGTCGTCC GGCGCCGAGC TGCTCGACGC CTTCGTCTAC CACAACTACT CCATCGGCGA TCAGCCCGGT TCGGTGCGCT TTGGCAAGCA GGTGGTGAGC TGGGGTGAAA GTACCTTCAT CGGCGGCGGC ATCAACTCGA TCAACCCCAT CGACGTGTCG GCGTTTCGCC GCCCAGGGGC CGAGATCAAG GAAGGCCTGA TCCCGGTCAA CATGTTCTAC ATCTCCCAGA GCCTGACCGA CAACCTGTCG GCTGAGGCCT TCTACCAGCT TGAATGGGAC CAGACGGTCG TCGACAACTG CGGCACCTTC TTCTCGCAGC CGGACATCAT TGCCGACGGC TGTACCGACA ACCTGCGCGT GCTGAACAGC AGCCGTACGG TGCCGGGCGC GGCCCAGCAA TTCCTTGCTA CCCAGGGCGT GAACATCAAC GAAGAGGGTG TGATGGTGCG CCGTGGCGCT GACCGCGACG CGCGTGACAG CGGGCAGTTC GGCGTGGCCA TGCGCTACAT GTTCGAGCCA TTGGACACCG AATTCGGTGC CTACTTCATG AACTACCACA GCCGTGCGCC AATCTTCAGT GCCACCGGCG CCCCGGCTTC GGTGTTCTCC GGTATCGCCG GCCTGCCGGC ACAGCTGCGA GCCTTGGCAC CCTTGATCGT GGCGGGTAAT TCGCAGTACT TCGTCGAGTA CCCGGAAGAT ATTCGACTCT ACGGCCTCAG TTTCTCCACC ACCTTGCCAA CCGGCACGGC ATGGAGCGGT GAGATCAGCT ACCGGCCCAA CGCGCCGGTA CAGTTGAACA CCACCGATAT CCTGTTTGCC GGTGTTCGTC CTCTGGGCGG CGCACTGACC AATGCTTCGC TGCTGGCGGG TACACCGGGC CAGGACCTGC ACGGCTATCG CCGTAAAGAG ATCACCCAGT TCCAGACCAC CTTGACGCAC TTCTTCGACC AAGTGATGGG CGCTAGCCGC ATGACCGTGG TGGGCGAACT GGGCGTCACC CACGTCGGCG GCCTGGAGAA TGCGCACGAT ACCCGTTATG GCCGCGACCC GGTGTTCGGC CCTGGCCCAT TGCCGTCCAC GGGCGGCGCG GACACCTGCC AGGCGCTCAA CGCCAGCACC ATCGCCGGCG CCGGTGCCGG TGCATCCACC ACCAACCTGA ACCGCAAATG CGAGAACGAT GGCTACACCA CCAGCACATC CTGGGGTTAT CGCGCCCGTG TCATTTGGGA TTACAACGAC GTATTCGCTG GGGTGAACCT GAAACCGAGC GTGGCCTGGT CGCATGACGT GTCCGGCTAC TCGCCGGGCC CTGGCGCCAA CTTCGAGGAA GGCCGCAAGG CTGTCAGCCT GGGCTTGGAT GCCGAATACC AGAACACCTA CACGGCAAGC CTGTCGTACA CCAACTTCTT CGACGGCAAG TACAGCACCG TGGATGACCG CGACTTCGTC GCCCTCAGCT TCGGCGTGAA CTTCTAA
|
Protein sequence | MKSANLFWRR AKLPLAVSLA STLASPAFAV SFNMGEIEGQ FDSSLSIGAS WSTANPNKNL IGVNNGGKGL SQTSDDGHLN FKKGETFSKI FKGIHDLELK YGDTGVFVRG KYWYDFELKD EGREFKDISD SNRKEGAKSS GAELLDAFVY HNYSIGDQPG SVRFGKQVVS WGESTFIGGG INSINPIDVS AFRRPGAEIK EGLIPVNMFY ISQSLTDNLS AEAFYQLEWD QTVVDNCGTF FSQPDIIADG CTDNLRVLNS SRTVPGAAQQ FLATQGVNIN EEGVMVRRGA DRDARDSGQF GVAMRYMFEP LDTEFGAYFM NYHSRAPIFS ATGAPASVFS GIAGLPAQLR ALAPLIVAGN SQYFVEYPED IRLYGLSFST TLPTGTAWSG EISYRPNAPV QLNTTDILFA GVRPLGGALT NASLLAGTPG QDLHGYRRKE ITQFQTTLTH FFDQVMGASR MTVVGELGVT HVGGLENAHD TRYGRDPVFG PGPLPSTGGA DTCQALNAST IAGAGAGAST TNLNRKCEND GYTTSTSWGY RARVIWDYND VFAGVNLKPS VAWSHDVSGY SPGPGANFEE GRKAVSLGLD AEYQNTYTAS LSYTNFFDGK YSTVDDRDFV ALSFGVNF
|
| |