Gene PputGB1_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0806 
Symbol 
ID5868565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp910827 
End bp912713 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content62% 
IMG OID641545906 
Producthypothetical protein 
Protein accessionYP_001667052 
Protein GI167031821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTG CAAACCTGTT CTGGCGCCGG GCCAAGTTGC CCTTGGCCGT CAGCCTTGCT 
TCCACGCTCG CAAGTCCTGC TTTCGCTGTC AGCTTCAACA TGGGTGAAAT CGAAGGCCAG
TTCGACTCGT CGCTCTCCAT CGGCGCCAGC TGGTCGACGG CCAACCCCAA CAAGAACCTG
ATCGGGGTGA ACAACGGCGG CAAGGGCCTG TCGCAGACAT CCGACGATGG CCACCTGAAC
TTCAAGAAGG GCGAAACCTT CTCCAAGATC TTCAAAGGCA TCCATGACCT GGAGCTCAAG
TACGGCGACA CCGGCGTGTT CGTGCGTGGC AAGTATTGGT ACGACTTCGA GCTGAAGGAC
GAAGGCCGCG AGTTCAAGGA CATCAGCGAC TCCAACCGCA AGGAGGGCGC CAAGTCGTCC
GGCGCCGAGC TGCTCGACGC CTTCGTCTAC CACAACTACT CCATCGGCGA TCAGCCCGGT
TCGGTGCGCT TTGGCAAGCA GGTGGTGAGC TGGGGTGAAA GTACCTTCAT CGGCGGCGGC
ATCAACTCGA TCAACCCCAT CGACGTGTCG GCGTTTCGCC GCCCAGGGGC CGAGATCAAG
GAAGGCCTGA TCCCGGTCAA CATGTTCTAC ATCTCCCAGA GCCTGACCGA CAACCTGTCG
GCTGAGGCCT TCTACCAGCT TGAATGGGAC CAGACGGTCG TCGACAACTG CGGCACCTTC
TTCTCGCAGC CGGACATCAT TGCCGACGGC TGTACCGACA ACCTGCGCGT GCTGAACAGC
AGCCGTACGG TGCCGGGCGC GGCCCAGCAA TTCCTTGCTA CCCAGGGCGT GAACATCAAC
GAAGAGGGTG TGATGGTGCG CCGTGGCGCT GACCGCGACG CGCGTGACAG CGGGCAGTTC
GGCGTGGCCA TGCGCTACAT GTTCGAGCCA TTGGACACCG AATTCGGTGC CTACTTCATG
AACTACCACA GCCGTGCGCC AATCTTCAGT GCCACCGGCG CCCCGGCTTC GGTGTTCTCC
GGTATCGCCG GCCTGCCGGC ACAGCTGCGA GCCTTGGCAC CCTTGATCGT GGCGGGTAAT
TCGCAGTACT TCGTCGAGTA CCCGGAAGAT ATTCGACTCT ACGGCCTCAG TTTCTCCACC
ACCTTGCCAA CCGGCACGGC ATGGAGCGGT GAGATCAGCT ACCGGCCCAA CGCGCCGGTA
CAGTTGAACA CCACCGATAT CCTGTTTGCC GGTGTTCGTC CTCTGGGCGG CGCACTGACC
AATGCTTCGC TGCTGGCGGG TACACCGGGC CAGGACCTGC ACGGCTATCG CCGTAAAGAG
ATCACCCAGT TCCAGACCAC CTTGACGCAC TTCTTCGACC AAGTGATGGG CGCTAGCCGC
ATGACCGTGG TGGGCGAACT GGGCGTCACC CACGTCGGCG GCCTGGAGAA TGCGCACGAT
ACCCGTTATG GCCGCGACCC GGTGTTCGGC CCTGGCCCAT TGCCGTCCAC GGGCGGCGCG
GACACCTGCC AGGCGCTCAA CGCCAGCACC ATCGCCGGCG CCGGTGCCGG TGCATCCACC
ACCAACCTGA ACCGCAAATG CGAGAACGAT GGCTACACCA CCAGCACATC CTGGGGTTAT
CGCGCCCGTG TCATTTGGGA TTACAACGAC GTATTCGCTG GGGTGAACCT GAAACCGAGC
GTGGCCTGGT CGCATGACGT GTCCGGCTAC TCGCCGGGCC CTGGCGCCAA CTTCGAGGAA
GGCCGCAAGG CTGTCAGCCT GGGCTTGGAT GCCGAATACC AGAACACCTA CACGGCAAGC
CTGTCGTACA CCAACTTCTT CGACGGCAAG TACAGCACCG TGGATGACCG CGACTTCGTC
GCCCTCAGCT TCGGCGTGAA CTTCTAA
 
Protein sequence
MKSANLFWRR AKLPLAVSLA STLASPAFAV SFNMGEIEGQ FDSSLSIGAS WSTANPNKNL 
IGVNNGGKGL SQTSDDGHLN FKKGETFSKI FKGIHDLELK YGDTGVFVRG KYWYDFELKD
EGREFKDISD SNRKEGAKSS GAELLDAFVY HNYSIGDQPG SVRFGKQVVS WGESTFIGGG
INSINPIDVS AFRRPGAEIK EGLIPVNMFY ISQSLTDNLS AEAFYQLEWD QTVVDNCGTF
FSQPDIIADG CTDNLRVLNS SRTVPGAAQQ FLATQGVNIN EEGVMVRRGA DRDARDSGQF
GVAMRYMFEP LDTEFGAYFM NYHSRAPIFS ATGAPASVFS GIAGLPAQLR ALAPLIVAGN
SQYFVEYPED IRLYGLSFST TLPTGTAWSG EISYRPNAPV QLNTTDILFA GVRPLGGALT
NASLLAGTPG QDLHGYRRKE ITQFQTTLTH FFDQVMGASR MTVVGELGVT HVGGLENAHD
TRYGRDPVFG PGPLPSTGGA DTCQALNAST IAGAGAGAST TNLNRKCEND GYTTSTSWGY
RARVIWDYND VFAGVNLKPS VAWSHDVSGY SPGPGANFEE GRKAVSLGLD AEYQNTYTAS
LSYTNFFDGK YSTVDDRDFV ALSFGVNF