Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0801 |
Symbol | |
ID | 5868560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 904920 |
End bp | 905738 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545901 |
Product | peptidase M48 Ste24p |
Protein accession | YP_001667047 |
Protein GI | 167031816 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.740627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGT CTTTTGTCGT CAGCCTGCTG AGTGCTGGCA TCCTGCTGGC CGGCTGCCAG GCGGTGAACA CCACCAGCGG AGGTGCTGTT GGCGTCGAGC GTCAGCAGTA CATGTTCAGC ATGCTCTCGA CCGATGAGGT CAACCAGATG TACGCCCAGT CGTACCAGCA AACCCTGGGT GAGGCCTCGA GCAAGGGTGT GCTCGACAAG TCCAGTGCCG ATGCCAAGCG GGTGCAGGTC ATTGCCAACC GACTGATCGC CCAGGCGCCC AAGTTCCGCC CGGATGCCGC GCAGTGGGAC TGGCAAGTCA ACGTGATCAA GAGCGACGAA CTCAACGCCA ACTGCGGCCC GGGCGGCAAG ATCATCGTCT ATACCGGCCT GATCGATCAG CTCAAGCTCA GCGATGCGGA AATTGCCGCA GTGGTGGGGC ACGAGATTGC CCACGCCCTG CGTGAGCACA GCCGCGAGGC CATGTCCAAG GCGTACGGTG TGGAAATGGC CCGCCAGGGT GCCGGTGCCA TCTTCGGCCT CGGCCAGAGC AGCATGGCCA TGGCCGACAC CGTGGTGAAC TACGCCATGA CCTTGCCCAA CAGCCGGGCC AACGAAAACG AGGCCGACCT GATTGGCCTG GAGCTGTCGG CGCGTGCCGG TTATGACCCG AATGCCGCGA TCACCTTGTG GAACAAGATG AGCAAGGCTT CCGAGGGTGC ACCGCCTGAG TTCATGAGCA CTCACCCGGC GTCGGAAAGC CGCATTGCTT CGCTGCAGGC GGCAATTCCG AAGGTGATGC CGCTGTATCA GGCCGCGGCC AAGCCGTAA
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Protein sequence | MRKSFVVSLL SAGILLAGCQ AVNTTSGGAV GVERQQYMFS MLSTDEVNQM YAQSYQQTLG EASSKGVLDK SSADAKRVQV IANRLIAQAP KFRPDAAQWD WQVNVIKSDE LNANCGPGGK IIVYTGLIDQ LKLSDAEIAA VVGHEIAHAL REHSREAMSK AYGVEMARQG AGAIFGLGQS SMAMADTVVN YAMTLPNSRA NENEADLIGL ELSARAGYDP NAAITLWNKM SKASEGAPPE FMSTHPASES RIASLQAAIP KVMPLYQAAA KP
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