| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0787 |
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| Symbol | upp |
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| ID | 5868546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 895825 |
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| End bp | 896463 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545887 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_001667033 |
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| Protein GI | 167031802 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.785203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACTC GTGAGATCCG CCATCCGCTG ATCCGCCACA AGCTCGGCCT GATGCGCCGT
GCCGATATCA GCACCAAGAA TTTTCGCGAA CTCGCCCAGG AAGTCGGCGC GCTCCTGACG
TATGAAGCCA CCCAGGACCT GCCCCTCGAA ACCTACGAGA TCGATGGCTG GTGTGGCAAG
GTCTCGGTTG AAAAAATCGC CGGCAAGAAG ATTACTGTAG TACCGATCCT GCGCGCCGGC
ATCGGCATGC TCGACGGCGT GCTCAGCCTG ATCCCTGGGG CGAAGGTCAG CGCCGTCGGT
GTTGCCCGTA ACGAAGAAAC CCTCGAAGCC CACACCTACC TGGAAAAGCT CGCGCCGGAC
ATCAACCAGC GCCTGGCCCT GATCATCGAC CCGATGCTGG CCACCGGCGG CTCGATGGTC
GCCACCATCG ACCTGCTTAA AAAGGCCGGC TGCAAAGAGA TCCGCGCCAT GGTGCTGGTC
GCCGCGCCAG AAGGCATCGA AGTGGTGGAA AAAGCCCACC CGGACGTGAA GATCTACACC
GCCTCGATCG ACCAGCGCCT GAACGAACAC GGCTACATCG TGCCGGGCCT GGGCGATGCC
GGTGACAAGA TCTTCGGCAC CAAGCAAAAG GACGCCTGA
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| Protein sequence | MPTREIRHPL IRHKLGLMRR ADISTKNFRE LAQEVGALLT YEATQDLPLE TYEIDGWCGK
VSVEKIAGKK ITVVPILRAG IGMLDGVLSL IPGAKVSAVG VARNEETLEA HTYLEKLAPD
INQRLALIID PMLATGGSMV ATIDLLKKAG CKEIRAMVLV AAPEGIEVVE KAHPDVKIYT
ASIDQRLNEH GYIVPGLGDA GDKIFGTKQK DA
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