Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0786 |
Symbol | |
ID | 5868545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 894548 |
End bp | 895822 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545886 |
Product | uracil-xanthine permease |
Protein accession | YP_001667032 |
Protein GI | 167031801 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACG GCTTCAACGA CCCGCTGTGG CGCCAGGTCG TTTCGGGCGC GCAGATGCTC TTCGTGGCAT TCGGCGCGCT GGTGCTGATG CCCCTGATCA CCGGCCTCGA CCCGAACGTC GCGCTGTTCA CCGCCGGCAT CGGCACGCTG CTGTTCCAGC TGGTCACCGG CCGCCAGGTG CCGGTGTTCC TGGCCTCGAG CTTTGCCTTC ATCACCCCGA TCATCCTCGC CAAGGGCCAG TTCGGCCTGG CCGAGACCAT GGGCGGCGTG ATGGCTGCAG GCTTCGTGTA CACCTTCATG GGCCTGATGG TAAAAATCAA AGGCACCGGC TTCATCGACC GCATGCTGCC ACCGGTGGTG ATCGGCCCGG TGATCATCTC CATCGGCCTG GCCATGGCGC CAATCGCCGC CAACATGGCG ATGGGCAAGG GTGGCGACGG CGCGGCACTG ATGCCGTACA AGACCGCCAT GCTGATCTCC ATGCCAGCCC TGCTGACAAC CCTGGTCGTC GCCGTGTTCG GCAAAGGCAT TTTCCGCCTG GTACCGATCA TTTCCGGCGT ACTGGTGGGC TTTGCCCTGT CATTCGCCTT TGGCGTGGTC GACACAGCCA AGATCGCCGC TGCACCGTGG CTGGAAATTC CCAATTTCAC CGCACCTGCG TTCAACTGGC AGGCCATTCT GTTCATCGTA CCGGTTGCCT TGGCGCCAGC GATCGAGCAT ATCGGCGGGG TGATCGCGGT CGGCAGCGTG ACTGGCCGTG ACTACCTGAA AAAACCCGGC CTGCACCGCA CCCTGCTGGG TGATGGCCTG GCTACCACTG CAGCCGGCCT GTTCGGCGGC CCGCCCAACA CCACCTACGC CGAAGTGACC GGCGCGGTGA TGCTGACCAA GAACTACAAT CCGAAGATCA TGACCTGGGC GGCGATTTTC GCCATCACAC TGGCATTCAT CGGCAAGTTC GGCGCGCTGC TGCAGAGCAT TCCGGTACCG GTGATGGGCG GTATCCTGTG CCTGCTGTTC GGCTCGATTG CGGCAGTGGG CATGAACACC ATGATCCGCC ACAAGATCGA CCTGGCCGAA GCACGCAACC TGGTGATCGT GTCGGTGACC CTGGTGTTCG GCATCGGCGG CGTGCTGATC GGCAGTGGTG ACGGCCCGGA TGACTGGGGC CTGAAGGGCA TCGCCCTGTG CGCCATCGTG GCTATTGCCC TGAATCTGAT CCTGCCGGGC AACGATGGCT GGAAGCACAA GAAGCTGGAT GACCAGTTGC CTTAA
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Protein sequence | MQDGFNDPLW RQVVSGAQML FVAFGALVLM PLITGLDPNV ALFTAGIGTL LFQLVTGRQV PVFLASSFAF ITPIILAKGQ FGLAETMGGV MAAGFVYTFM GLMVKIKGTG FIDRMLPPVV IGPVIISIGL AMAPIAANMA MGKGGDGAAL MPYKTAMLIS MPALLTTLVV AVFGKGIFRL VPIISGVLVG FALSFAFGVV DTAKIAAAPW LEIPNFTAPA FNWQAILFIV PVALAPAIEH IGGVIAVGSV TGRDYLKKPG LHRTLLGDGL ATTAAGLFGG PPNTTYAEVT GAVMLTKNYN PKIMTWAAIF AITLAFIGKF GALLQSIPVP VMGGILCLLF GSIAAVGMNT MIRHKIDLAE ARNLVIVSVT LVFGIGGVLI GSGDGPDDWG LKGIALCAIV AIALNLILPG NDGWKHKKLD DQLP
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