| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0784 |
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| Symbol | |
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| ID | 5868543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 892497 |
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| End bp | 893402 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545884 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001667030 |
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| Protein GI | 167031799 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
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| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.848938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATAT TGCTGACAGG TGGCACCGGT TTGATTGGCA AGCATCTGTG CCAGTACTGG
CTTGGCCAGG GGCATCGGCT CACGGTATGG AGCCGGCGTC CTGAGCAGGT GGCGAACATT
TGCGGTAGTG GCGTGCGTGG CATCGCCCGC CTGGAGCAAC TGGAAGCAGA CGATCATCTT
GATGCGGTGG TCAACCTTGC CGGTGCGCCA ATCGCGGATA GGCCCTGGAC GGCGGCCCGG
CGCAACGTGC TGTGGGCCAG CCGCGTCACC CTCACCGAGC AGCTGCTGGC GTGGCTGGGC
TCCCGTGAAC AGCGCCCGCA AGTGCTGATT TCCGGCTCTG CGGTAGGCTG GTACGGTGAC
GGCGGCGAAC GCGAGCTGAC CGAGGCCTCA CCACCGGTGC GGGAAGACTT CGCCAGCCAG
TTGTGTATTG CCTGGGAAGA GACGGCACAG CGTTCTCAAG CGCAAGGAAT CCGCGTGGTA
TTGGTGCGCA CCGGGTTGGT GCTGGCCAGC GATGGCGGCT TTTTGTCGCG CCTGCGCGTG
CCCTTCAAAC TGGGGCTGGG TGGGCCTTTG GGCGGTGGGC GGCAGTGGAT GCCCTGGGTG
CATATAGACG ACCAGGTCGC CCTGATTGAT TTTCTCTTGC AGCACAAGGA TGCCAGCGGT
CCTTATAATG CCTGCGCCCC AGAGCCGGTG CGCAACCGTG AGTTCGCCAG GCGGCTGGGC
CGTGCGCTGC ATAGGCCGGC GCTGCTGCCT GTACCGGCGC TGCTGCTCAA GGCCGGCCTT
GGCGAAATGT CGACCTTGCT GCTGGGCGGC CAGCGCGCGC GCCCGGTGCG CTTGCTGGCG
GCGGGCTTCA CCTTCCGCTT CAACGATCTG CAATCGGCGC TGGACAACCT GTCCAGCCGC
CTCTGA
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| Protein sequence | MHILLTGGTG LIGKHLCQYW LGQGHRLTVW SRRPEQVANI CGSGVRGIAR LEQLEADDHL
DAVVNLAGAP IADRPWTAAR RNVLWASRVT LTEQLLAWLG SREQRPQVLI SGSAVGWYGD
GGERELTEAS PPVREDFASQ LCIAWEETAQ RSQAQGIRVV LVRTGLVLAS DGGFLSRLRV
PFKLGLGGPL GGGRQWMPWV HIDDQVALID FLLQHKDASG PYNACAPEPV RNREFARRLG
RALHRPALLP VPALLLKAGL GEMSTLLLGG QRARPVRLLA AGFTFRFNDL QSALDNLSSR
L
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