Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0782 |
Symbol | |
ID | 5868541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 890255 |
End bp | 891223 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641545882 |
Product | hypothetical protein |
Protein accession | YP_001667028 |
Protein GI | 167031797 |
COG category | [S] Function unknown |
COG ID | [COG3272] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCGACT CTTTCGCCTG CAGCAAGCCG CGTATCGCCA TCAGTGCCTG CCTGACTGGG CACAGCGTGC GCTACAACGG CGGCCACAAG GCCTCCGATC TTTGCCGTAC ACAGCTGGAA CAACACTTCG AATGGCTGCC CGTGTGCCCG GAAGTGGCAA TCGGCCTGGG CATTCCGCGT GACCCCATTC GCCTGGTAGG CAACCCCGAA CAACCCGAAG TGGTCGGCAC CCGCGACCCT GGCATGGACC TGACCGGCCC GCTGCGCACC TATGGCGAAC AAATGGCGGC TGAGCTCGAC GACATCTGCG GCTACATCTT CATGCAGAAG TCACCTTCTT GCGGCCTGGA ACGGGTCAAG GTTTACCAGG CCAACGGCCA CCCAGCCTTG CATGGCGGGC GTGGCGTCTA TGCCCACGCT TTCTGCGCTC TGCGCCCGGA CCTGCCCGTT GAAGAAGAAG GCCGCCTGCA TGACCCCGTG CTGCGCGAGA ACTTCATCAG CCGCGTATAC GCCTACGCCG ACTGGCAGCG CCTGCTGGCC GAAGGGCTGA GCCGTGGCGC CCTGGTGCGC TTTCACTCGC GCTACAAGTA TTTGCTGATG GCCAACAACC CGCAGGCCTA TCGCACCCTC GGCCGCCTGC TTGGCAGCAT GAGCAAGGAT GACGACCCGC TCAGCTTCGG CCCGCGCTAT TTCAGCCAAC TGATGCAGGC CCTGCGCCGC TGCGCCAGCC GCGGCACCCA CTGCAACGTG CTGCAGCACC TGAGCGGTTA CTTCAAGGAT GCCCTGACGC AGCAGGACAA GGCCGAGTTG CAGACGGTCA TCGGCCAGTA CCAACAGGGC GTCGTGCCGC TGGTAGTGCC CCTGACTCTG CTCAAGCACC ATCTGCGCAA GCACCCTGAC CCGTACCTGC AGCAGCAGGC CTACCTGCAA CCGCACCCTG AAAGCCTGGG CTTGCGCAAT GCAGTCTGA
|
Protein sequence | MLDSFACSKP RIAISACLTG HSVRYNGGHK ASDLCRTQLE QHFEWLPVCP EVAIGLGIPR DPIRLVGNPE QPEVVGTRDP GMDLTGPLRT YGEQMAAELD DICGYIFMQK SPSCGLERVK VYQANGHPAL HGGRGVYAHA FCALRPDLPV EEEGRLHDPV LRENFISRVY AYADWQRLLA EGLSRGALVR FHSRYKYLLM ANNPQAYRTL GRLLGSMSKD DDPLSFGPRY FSQLMQALRR CASRGTHCNV LQHLSGYFKD ALTQQDKAEL QTVIGQYQQG VVPLVVPLTL LKHHLRKHPD PYLQQQAYLQ PHPESLGLRN AV
|
| |