| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0780 |
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| Symbol | |
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| ID | 5868539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 887948 |
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| End bp | 889375 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545880 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001667026 |
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| Protein GI | 167031795 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.431367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGA CCTGGCTGCG CAGCGATCTG CGCATCGATG ACAACACTGC ACTCAGCGCC
GCCACCGAGC GCGGGCCGAC CATCGCCCTG TGGCTGGTCA GCCCAGGGCA ATGGCAAGCC
CATGACGACG CCGCCTGCAA GGTCGACTTC TGGCTGCGCA ACTTGCGCGC CCTGCGCCAA
TCGCTCGAAG GCCTGAATAT CCCCCTGCTG ATCCGCAAGA TCGACACCTG GGACCAGGCC
CCCCAGGCGG TGCTCGATGT ATGCCGCCAA CACCAGGTGC AAAGCGTGCA CTGGAACGAA
GAGTACGGCA TCAACGAACA GCAACGCGAC GATGCGACCC GCGCGCTGCT GGAGAAGTCG
TCCATCCAGG CCTGCAGCCA CCTCGACCAG CTGTTGTTCC GCCCTGGCAC CATCCTTACC
CGCAGCGGCG ACTACTTCCA GGTCTTCAGC CAGTTCAAGA AGACCTGCCT GGAACACCTG
CACCGCAGCC TGCCTGCCCT GGCCCGCCGG GTGGAGCGTC AGGCACCGCT GCAAATCCAA
AGTGACCCGA TTCCACAACA CGTAGACGGT TTTGAAACCC CCACGCGCGC CTTGCGTGAG
CATTGGCCGG CGGGTGAGGC CGAAGCGCAG GCGCGCCTGT CCCGCTTTCT GGACGAAACC
ATCGACGAAT ACCAACAATT GCGTGACCTG CCTGCCAAGC ACGGCACCAG CCAACTCTCC
ACCTACCTGG CCGCTGGCGT GATCTCGCCG CGCCAATGCC TGCACGGCGC ACTGGCCAGC
AACCGGGGCG AGTTCGACAG CGGCAGTACG GGCGTGCAGA CCTGGATCAA CGAGCTGCTC
TGGCGCGAGT TCTACAAGCA CATCCTGAAC GGTTACCCAC AGGTCTCGCG CCACCGCGCC
TTTCGCGCCC ATACCGAAGC CCTGCCCTGG CGTGACGCCC CGGCGGACCT GGAAGCCTGG
AAACAGGGCC GCACCGGGTT CCCGATCATC GATGCGGCCA TGCGCCAACT GCTGCACACC
GGATGGATGC ACAACCGCCT GCGCATGGTC GTGGCCATGT TCCTCAGCAA GAACCTGCTG
ATCGACTGGC GCAAGGGCGA GCGACACTTC ATGCGCCACC TGATAGACGG CGACCTGGCC
GCCAACAACG GCGGCTGGCA GTGGAGCGCG TCCACCGGCA CCGACGCTGT GCCTTATTTC
CGCATTTTCA ACCCAGTTTC TCAGTCTCAG CGTTTCGACC CACAGGGGCG CTTCATCCGG
CACTGGCTGC CCGAATTACG CGACATGGAT GAGAAAACTA TCCATGAGCC GATGAAATCT
GATGATCTTT TTGCTAATAA TTCGTATCAC CGTCCAATGG TCATTCTCGG CAGCAGTCGC
CAGCGTGCAC TGGAAGCCTT CAAAGGCCTA CCACGTCGGC AGGATTAG
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| Protein sequence | MHLTWLRSDL RIDDNTALSA ATERGPTIAL WLVSPGQWQA HDDAACKVDF WLRNLRALRQ
SLEGLNIPLL IRKIDTWDQA PQAVLDVCRQ HQVQSVHWNE EYGINEQQRD DATRALLEKS
SIQACSHLDQ LLFRPGTILT RSGDYFQVFS QFKKTCLEHL HRSLPALARR VERQAPLQIQ
SDPIPQHVDG FETPTRALRE HWPAGEAEAQ ARLSRFLDET IDEYQQLRDL PAKHGTSQLS
TYLAAGVISP RQCLHGALAS NRGEFDSGST GVQTWINELL WREFYKHILN GYPQVSRHRA
FRAHTEALPW RDAPADLEAW KQGRTGFPII DAAMRQLLHT GWMHNRLRMV VAMFLSKNLL
IDWRKGERHF MRHLIDGDLA ANNGGWQWSA STGTDAVPYF RIFNPVSQSQ RFDPQGRFIR
HWLPELRDMD EKTIHEPMKS DDLFANNSYH RPMVILGSSR QRALEAFKGL PRRQD
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